RNA–Protein interactions for RNA: ENST00000540558.1

RHBDL2-203, Transcript of rhomboid like 2, humanhuman

TSL 1 (best) BASIC

Gene RHBDL2, Length 697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL2-203ENST00000540558 HFE2Q6ZVN8 426 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 DDX42Q86XP3 938 aaKnown RBP eCLIP16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 MIB1Q86YT6 1006 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 WDTC1Q8N5D0 677 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 TMEM35BQ8NCS4 154 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 FLCNQ8NFG4 579 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 STK32AQ8WU08 396 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 DNASE1L2Q92874 299 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 PBXIP1Q96AQ6 731 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 FAM149B1Q96BN6 582 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 ASIC4Q96FT7 647 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 PPP1R13BQ96KQ4 1090 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 ARHGEF3Q9NR81 526 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 HEBP1Q9NRV9 189 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 SEPT11Q9NVA2 429 aaKnown RBP16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 DUS2Q9NX74 493 aaKnown RBP16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 DNMT3LQ9UJW3 386 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 WNT6Q9Y6F9 365 aa16.69■□□□□ 0.26
RHBDL2-203ENST00000540558 MIA3Q5JRA6 1907 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 LRRC53A6NM62 1247 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 PDGFBP01127 241 aaPredicted RBP16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 LTFP02788 710 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 HMBSP08397 361 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 CCDC172P0C7W6 258 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 FERP16591 822 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 SNX16P57768 344 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 TNK2Q07912 1038 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 GOLGA8FQ08AF8 430 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 GOLGA8DPQ0D2H9 430 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 MLF2Q15773 248 aaPredicted RBP16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 TMEM31Q5JXX7 168 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 OR6B2Q6IFH4 312 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 BHLHA9Q7RTU4 235 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 ZNF677Q86XU0 584 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 SCML4Q8N228 414 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 IPO4Q8TEX9 1081 aaKnown RBP16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 CPLX3Q8WVH0 158 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 IRGQQ8WZA9 623 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 DDX1Q92499 740 aaKnown RBP16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 CPXM1Q96SM3 734 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 NUP58Q9BVL2 599 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 EBF3Q9H4W6 596 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 ABCC13Q9NSE7 274 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 GTSE1Q9NYZ3 720 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 TJP2Q9UDY2 1190 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 STRIP2Q9ULQ0 834 aa16.68■□□□□ 0.26
RHBDL2-203ENST00000540558 BDP1A6H8Y1 2624 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 COL4A3Q01955 1670 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 KRBA1A5PL33 1030 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 SART1O43290 800 aaKnown RBP16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 ARSAP15289 507 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 TCF3P15923 654 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 RPL34P49207 117 aaKnown RBP16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 CDR2Q01850 454 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 ASIC2Q16515 512 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 SFMBT2Q5VUG0 894 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 TPRG1Q6ZUI0 275 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 TMEM110Q86TL2 294 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 ERICH1Q86X53 443 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 OSCP1Q8WVF1 389 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 CPA5Q8WXQ8 436 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 BAP1Q92560 729 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 SHDQ96IW2 340 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 KLF16Q9BXK1 252 aaPredicted RBP16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 C11orf16Q9NQ32 467 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 OLA1Q9NTK5 396 aaKnown RBP16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 MARCH2Q9P0N8 246 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 NOCTQ9UK39 431 aaKnown RBP16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 COL4A2P08572 1712 aa16.67■□□□□ 0.26
RHBDL2-203ENST00000540558 SLC12A8A0AV02 714 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 CAPN9O14815 690 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 PAPSS1O43252 624 aaPredicted RBP16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 GPR37L1O60883 481 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 ERBB2P04626 1255 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 NCAM1P13591 858 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 CHRNB2P17787 502 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 PBX1P40424 430 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 FMO1Q01740 532 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 RUNX3Q13761 415 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 PDGFRLQ15198 375 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 PTPN20Q4JDL3 420 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 NAA35Q5VZE5 725 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 KLHDC10Q6PID8 442 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 FMNL3Q8IVF7 1028 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 ZNF276Q8N554 614 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 MSANTD4Q8NCY6 345 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 ZNF397Q8NF99 534 aaPredicted RBP16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 WBP2Q969T9 261 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 ZFRQ96KR1 1074 aaKnown RBP16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 FAM83CQ9BQN1 747 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 RBSNQ9H1K0 784 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 LINC00597Q9H2U6 94 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 SFMBT1Q9UHJ3 866 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 LSM7Q9UK45 103 aaKnown RBP16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 MYO6Q9UM54 1294 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 PIAS3Q9Y6X2 628 aa16.66■□□□□ 0.26
RHBDL2-203ENST00000540558 CUL9Q8IWT3 2517 aa16.65■□□□□ 0.26
RHBDL2-203ENST00000540558 E2F8A0AVK6 867 aa16.65■□□□□ 0.26
RHBDL2-203ENST00000540558 ARNTLO00327 626 aa16.65■□□□□ 0.26
RHBDL2-203ENST00000540558 SLC9A3R1O14745 358 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms