RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 EBF1Q9UH73 591 aa22.09■■□□□ 1.13
CHFR-217ENST00000540537 A0A0A0MRY4 1105 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 AXIN1O15169 862 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 PMM2O15305 246 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 HOXC11O43248 304 aaPredicted RBP22.08■■□□□ 1.13
CHFR-217ENST00000540537 KAT7O95251 611 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 RARGP13631 454 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 GRIA2P42262 883 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 MRPS21P82921 87 aaKnown RBP22.08■■□□□ 1.13
CHFR-217ENST00000540537 SPEM2Q0P670 501 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 C2orf27AQ580R0 203 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 CACNA2D4Q7Z3S7 1137 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 TADA2BQ86TJ2 420 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 ETFBKMTQ8IXQ9 262 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 ZNF276Q8N554 614 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 ARHGEF4Q9NR80 690 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 SPHK2Q9NRA0 654 aa22.08■■□□□ 1.13
CHFR-217ENST00000540537 MYO18AQ92614 2054 aaKnown RBP22.07■■□□□ 1.12
CHFR-217ENST00000540537 PPP1R3GB7ZBB8 358 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 GADD45BO75293 160 aaPredicted RBP22.07■■□□□ 1.12
CHFR-217ENST00000540537 CCDC192P0DO97 292 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 SDHBP21912 280 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 BMP6P22004 513 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 FMO5P49326 533 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 MORC3Q14149 939 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 RSPO4Q2I0M5 234 aaPredicted RBP22.07■■□□□ 1.12
CHFR-217ENST00000540537 HSF5Q4G112 596 aaPredicted RBP22.07■■□□□ 1.12
CHFR-217ENST00000540537 PREPLQ4J6C6 727 aaPredicted RBP22.07■■□□□ 1.12
CHFR-217ENST00000540537 BTBD8Q5XKL5 378 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 TTI2Q6NXR4 508 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 SCD5Q86SK9 330 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 PHTF2Q8N3S3 785 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 ANKRD52Q8NB46 1076 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 TSTD1Q8NFU3 115 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 LOXL4Q96JB6 756 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 CDK5RAP1Q96SZ6 601 aaKnown RBP22.07■■□□□ 1.12
CHFR-217ENST00000540537 CLIC5Q9NZA1 410 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 DNMT3LQ9UJW3 386 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 NAGPAQ9UK23 515 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 LSM7Q9UK45 103 aaKnown RBP22.07■■□□□ 1.12
CHFR-217ENST00000540537 MMP17Q9ULZ9 603 aa22.07■■□□□ 1.12
CHFR-217ENST00000540537 BICDL2A1A5D9 508 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 CHRM1P11229 460 aaPredicted RBP22.06■■□□□ 1.12
CHFR-217ENST00000540537 RALAP11233 206 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 TBXAS1P24557 533 aaPredicted RBP22.06■■□□□ 1.12
CHFR-217ENST00000540537 TNFRSF4P43489 277 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 PLA2G4AP47712 749 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 SLC8A3P57103 927 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 MESP2Q0VG99 397 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 CCDC40Q4G0X9 1142 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 RAB41Q5JT25 222 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 C10orf120Q5SQS8 335 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 KLHL10Q6JEL2 608 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 NELFBQ8WX92 580 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 SEMA4GQ9NTN9 838 aa22.06■■□□□ 1.12
CHFR-217ENST00000540537 KDSRQ06136 332 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 CSRP2Q16527 193 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 ANO4Q32M45 955 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 KBTBD6Q86V97 674 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 PIGZQ86VD9 579 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 TTC30AQ86WT1 665 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 TMEM25Q86YD3 366 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 SFTPA1Q8IWL2 248 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 ARHGAP18Q8N392 663 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 UBR7Q8N806 425 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 ZC3H10Q96K80 434 aaKnown RBP22.05■■□□□ 1.12
CHFR-217ENST00000540537 NUDT5Q9UKK9 219 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 DNAH14Q0VDD8 3507 aa22.05■■□□□ 1.12
CHFR-217ENST00000540537 ANTXRLA6NF34 631 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 MDM4O15151 490 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 FOXD2O60548 495 aaPredicted RBP22.04■■□□□ 1.12
CHFR-217ENST00000540537 TULP3O75386 442 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 KIR2DL1P43626 348 aaPredicted RBP22.04■■□□□ 1.12
CHFR-217ENST00000540537 BCAT1P54687 386 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 LRMPQ12912 555 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 GOLGA7BQ2TAP0 167 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 SGO2Q562F6 1265 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 DGLUCYQ7Z3D6 616 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 RASSF3Q86WH2 238 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 CCDC33Q8N5R6 958 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 MARK1Q9P0L2 795 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 DEC1Q9P2X7 70 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 CTNND2Q9UQB3 1225 aa22.04■■□□□ 1.12
CHFR-217ENST00000540537 BIN1O00499 593 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 XPO1O14980 1071 aaKnown RBP22.03■■□□□ 1.12
CHFR-217ENST00000540537 P4HA2O15460 535 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 EPN2O95208 641 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 TIE1P35590 1138 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 DGKEP52429 567 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 CETN1Q12798 172 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 CRY1Q16526 586 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 Q6ZNB5 142 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 NUDT18Q6ZVK8 323 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 ALLCQ8N6M5 410 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 NAT16Q8N8M0 369 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 IL17RCQ8NAC3 791 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 TXNDC5Q8NBS9 432 aaKnown RBP22.03■■□□□ 1.12
CHFR-217ENST00000540537 NT5C1BQ96P26 610 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 WDR35Q9P2L0 1181 aa22.03■■□□□ 1.12
CHFR-217ENST00000540537 HESX1Q9UBX0 185 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms