RNA–Protein interactions for RNA: ENST00000540317.5

CYB561A3-215, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-215ENST00000540317 DCXO43602 365 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 RNF40O75150 1001 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 TADA2AO75478 443 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 TJP3O95049 919 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 GAS8O95995 478 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 URODP06132 367 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 THP07101 528 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 EPCAMP16422 314 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 PSMA2P25787 234 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 KLF1Q13351 362 aaPredicted RBP12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 CBX2Q14781 532 aaPredicted RBP12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 TMEM31Q5JXX7 168 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 CYP4A22Q5TCH4 519 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 ARHGAP17Q68EM7 881 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 TTC27Q6P3X3 843 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 DPH6Q7L8W6 267 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 ZDHHC17Q8IUH5 632 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 ATL2Q8NHH9 583 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 KLHL5Q96PQ7 755 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 CPXM1Q96SM3 734 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 TRIM51Q9BSJ1 452 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 DCLK3Q9C098 648 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 DPH5Q9H2P9 285 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 SLC38A7Q9NVC3 462 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 ASNSD1Q9NWL6 643 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 MARCH5Q9NX47 278 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 VPS18Q9P253 973 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 HESX1Q9UBX0 185 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 TUBGCP4Q9UGJ1 667 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 HMGXB4Q9UGU5 601 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 SSX2IPQ9Y2D8 614 aa12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 PDCD11Q14690 1871 aaKnown RBP12.51□□□□□ -0.41
CYB561A3-215ENST00000540317 TCRBV7S2A1N4TA0A589 114 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 FAM86C2PA6NEL3 165 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 RNF8O76064 485 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CNPP09543 421 aaKnown RBP12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 RALAP11233 206 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 COL9A1P20849 921 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 LRPAP1P30533 357 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 TAF6P49848 677 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CAV1Q03135 178 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 ZNF252P-AS1Q0IIN9 211 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 PPP1R7Q15435 360 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 TRADDQ15628 312 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 RARS2Q5T160 578 aaKnown RBP12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 DRICH1Q6PGQ1 229 aaPredicted RBP12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 DDX42Q86XP3 938 aaKnown RBP eCLIP12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 RNF135Q8IUD6 432 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 ZDHHC14Q8IZN3 488 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CRYBG2Q8N1P7 616 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 C12orf76Q8N812 135 aaPredicted RBP12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 BBOF1Q8ND07 529 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CCHCR1Q8TD31 782 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 SUSD6Q92537 303 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 C18orf25Q96B23 403 aaPredicted RBP12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 ZIM3Q96PE6 472 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 FRMD8P1Q9BZ68 369 aaPredicted RBP12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 ADAM7Q9H2U9 754 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CYLDQ9NQC7 956 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 WHRNQ9P202 907 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CYTH4Q9UIA0 394 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 ADAM28Q9UKQ2 775 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 TSPAN16Q9UKR8 245 aa12.5□□□□□ -0.41
CYB561A3-215ENST00000540317 CASTOR2A6NHX0 329 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 GOLGA6L10A6NI86 522 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 KPNA7A9QM74 516 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 F8VP50 259 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 GOLGA8SH3BPF8 625 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 PTGESO14684 152 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 NDC80O14777 642 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 PPFIA2O75334 1257 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 KRT1P04264 644 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 ERBB2P04626 1255 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 ITIH2P19823 946 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 SP100P23497 879 aaPredicted RBP12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 RFC1P35251 1148 aaPredicted RBP12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 PCK1P35558 622 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 GLUD2P49448 558 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 CALCOCO2Q13137 446 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 TUSC3Q13454 348 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 PTK6Q13882 451 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 USP41Q3LFD5 358 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 TFDP3Q5H9I0 405 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 ZFYVE27Q5T4F4 411 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 FUT10Q6P4F1 479 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 LIMS2Q7Z4I7 341 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 TMC3Q7Z5M5 1100 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 APPL2Q8NEU8 664 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 OR6B3Q8NGW1 331 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 SLC22A17Q8WUG5 538 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 B3GALT6Q96L58 329 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 SLITRK1Q96PX8 696 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 LRFN3Q9BTN0 628 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 GPR62Q9BZJ7 368 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 CXCL16Q9H2A7 254 aa12.49□□□□□ -0.41
CYB561A3-215ENST00000540317 SNX25Q9H3E2 840 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms