RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SLC8A3P57103 927 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 C10orf120Q5SQS8 335 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 CDKAL1Q5VV42 579 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 PM20D1Q6GTS8 502 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 PKN3Q6P5Z2 889 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 DDX42Q86XP3 938 aaKnown RBP eCLIP15.84■□□□□ 0.13
UBE3B-212ENST00000540230 LRRC4Q9HBW1 653 aa15.84■□□□□ 0.13
UBE3B-212ENST00000540230 FANCMQ8IYD8 2048 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 ANTXRLA6NF34 631 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 TRDMT1O14717 391 aaKnown RBP15.83■□□□□ 0.12
UBE3B-212ENST00000540230 LAMTOR5O43504 91 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 ZBED1O96006 694 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 LCP1P13796 627 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 OPRD1P41143 372 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 MFAP3P55082 362 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 YWHAGP61981 247 aaKnown RBP eCLIP15.83■□□□□ 0.12
UBE3B-212ENST00000540230 MESP2Q0VG99 397 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 DHCR24Q15392 516 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 STX1AQ16623 288 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 DENND1BQ6P3S1 775 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 RHBDF2Q6PJF5 856 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 C12orf40Q86WS4 652 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 CLEC4CQ8WTT0 213 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 KCTD13Q8WZ19 329 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 SHC3Q92529 594 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 ANO10Q9NW15 660 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 FANCLQ9NW38 375 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 CLIC5Q9NZA1 410 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 SH3BP1Q9Y3L3 701 aa15.83■□□□□ 0.12
UBE3B-212ENST00000540230 KIAA1549LQ6ZVL6 1849 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 YJEFN3A6XGL0 299 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 E7ENQ6 273 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 PES1O00541 588 aaKnown RBP15.82■□□□□ 0.12
UBE3B-212ENST00000540230 LETM1O95202 739 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-212ENST00000540230 EEF1GP26641 437 aaKnown RBP15.82■□□□□ 0.12
UBE3B-212ENST00000540230 PSEN1P49768 467 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 SATB1Q01826 763 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 LRRC32Q14392 662 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 CAVIN1Q6NZI2 390 aaKnown RBP15.82■□□□□ 0.12
UBE3B-212ENST00000540230 KLHDC10Q6PID8 442 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 ENOSF1Q7L5Y1 443 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 ALYREFQ86V81 257 aaKnown RBP15.82■□□□□ 0.12
UBE3B-212ENST00000540230 MIB1Q86YT6 1006 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 KIAA1958Q8N8K9 716 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 P2RY13Q9BPV8 354 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 IRF2BPLQ9H1B7 796 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 PRMT8Q9NR22 394 aaPredicted RBP15.82■□□□□ 0.12
UBE3B-212ENST00000540230 CYTH4Q9UIA0 394 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 RASAL2Q9UJF2 1139 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 DNMT3LQ9UJW3 386 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 DNAJC12Q9UKB3 198 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 R4GN57 208 aa15.82■□□□□ 0.12
UBE3B-212ENST00000540230 RALAP11233 206 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 GNA15P30679 374 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 USP8P40818 1118 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 NBL1P41271 181 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 GPD2P43304 727 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 DAOAP59103 153 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 CSTF1Q05048 431 aaKnown RBP15.81■□□□□ 0.12
UBE3B-212ENST00000540230 TYRO3Q06418 890 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 EFEMP1Q12805 493 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 NCAPHQ15003 741 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 KRT31Q15323 416 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 STILQ15468 1287 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 DGKKQ5KSL6 1271 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 LY6G5CQ5SRR4 150 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 SFTPA1Q8IWL2 248 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 ZNF276Q8N554 614 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 ZNF606Q8WXB4 792 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 CD101Q93033 1021 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 VPS16Q9H269 839 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 HSD3B7Q9H2F3 369 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 POLR3BQ9NW08 1133 aaPredicted RBP15.81■□□□□ 0.12
UBE3B-212ENST00000540230 FHOD1Q9Y613 1164 aa15.81■□□□□ 0.12
UBE3B-212ENST00000540230 SLC9A3R1O14745 358 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-212ENST00000540230 THAP12O43422 761 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 STC2O76061 302 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 HMBSP08397 361 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 TDGF1P13385 188 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 HOXD11P31277 338 aaPredicted RBP15.8■□□□□ 0.12
UBE3B-212ENST00000540230 SLC6A11P48066 632 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 KLK7P49862 253 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 MRE11P49959 708 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 GRSF1Q12849 480 aaKnown RBP eCLIP15.8■□□□□ 0.12
UBE3B-212ENST00000540230 NR1H3Q13133 447 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 HTR3DQ70Z44 454 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 SIX6OS1Q8N1H7 587 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 EDEM1Q92611 657 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 P2RY11Q96G91 374 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 TBC1D14Q9P2M4 693 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 FBXO4Q9UKT5 387 aa15.8■□□□□ 0.12
UBE3B-212ENST00000540230 FOXN3O00409 490 aaPredicted RBP15.79■□□□□ 0.12
UBE3B-212ENST00000540230 RNF40O75150 1001 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 KLKB1P03952 638 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 ADH5P11766 374 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 AMPD2Q01433 879 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 MYL5Q02045 173 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 BSPRYQ5W0U4 402 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 Q6ZNB5 142 aa15.79■□□□□ 0.12
UBE3B-212ENST00000540230 TMEM25Q86YD3 366 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms