RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	TMEM114	B3SHH9	223 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FKBP6	O75344	327 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CRABP2	P29373	138 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PPP2R1B	P30154	601 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	AVPR1A	P37288	418 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NPY2R	P49146	381 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RHOA	P61586	193 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CDC16	Q13042	620 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	C1D	Q13901	141 aa	Known RBP	9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CTXN3	Q4LDR2	81 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GNAS	Q5JWF2	1037 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MFSD4B	Q5TF39	518 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MTSS1L	Q765P7	747 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DEPDC7	Q96QD5	511 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FICD	Q9BVA6	458 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PHACTR1	Q9C0D0	580 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	IL1RL2	Q9HB29	575 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RABGEF1	Q9UJ41	708 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MAPRE3	Q9UPY8	281 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ZDHHC9	Q9Y397	364 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680		A0A087X1B8	175 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TRIM24	O15164	1050 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NR2C2	P49116	596 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ANTXR2	P58335	489 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	BTK	Q06187	659 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GRB10	Q13322	594 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TDRD5	Q8NAT2	981 aa	Known RBP	9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DDHD1	Q8NEL9	900 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ANKRD7	Q92527	254 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RUSC1	Q9BVN2	902 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KLHL4	Q9C0H6	718 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	KCTD10	Q9H3F6	313 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PCDHB12	Q9Y5F1	795 aa		9.27	□□□□□ -0.93
ECHDC2-222	ENST00000539680		E9PCH4	1651 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680		A0A0G2JLW4	131 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ATMIN	O43313	823 aa	Predicted RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RTN3	O95197	1032 aa	Predicted RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PCNA	P12004	261 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	EPB42	P16452	691 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PSMC3	P17980	439 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CAP2	P40123	477 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PIK3CG	P48736	1102 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CCNG1	P51959	295 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CREM	Q03060	361 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CYP24A1	Q07973	514 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MMRN1	Q13201	1228 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CCNG2	Q16589	344 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	C16orf62	Q7Z3J2	963 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLC26A11	Q86WA9	606 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SCUBE1	Q8IWY4	988 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	C4orf19	Q8IY42	314 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM172A	Q8WUF8	416 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CASKIN2	Q8WXE0	1202 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	BBS2	Q9BXC9	721 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TRIM8	Q9BZR9	551 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ADARB2	Q9NS39	739 aa	Known RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TRHDE	Q9UKU6	1024 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RPS6KL1	Q9Y6S9	549 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CNOT3	O75175	753 aa	Known RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	DGKI	O75912	1065 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SUPT7L	O94864	414 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SGPL1	O95470	568 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	HPGD	P15428	266 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	HOXB8	P17481	243 aa	Predicted RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PGAM1	P18669	254 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MSH3	P20585	1137 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	GTF2E2	P29084	291 aa	Known RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ATP6AP1L	Q52LC2	224 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RAD9B	Q6WBX8	426 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ANKRD49	Q8WVL7	239 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NFKBIZ	Q9BYH8	718 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	AGO4	Q9HCK5	861 aa	Known RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLC40A1	Q9NP59	571 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CACNA2D2	Q9NY47	1150 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	AP4E1	Q9UPM8	1137 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM220BP	B1ANY3	271 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TH	P07101	528 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RARG	P13631	454 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CYP11B1	P15538	503 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TCN1	P20061	433 aa	Predicted RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	IFNGR2	P38484	337 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	MYL6	P60660	151 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SPDYC	Q5MJ68	293 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SCARA3	Q6AZY7	606 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	FAM45BP	Q6NSW5	357 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NIPA1	Q7RTP0	329 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	LRRC6	Q86X45	466 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	WDR48	Q8TAF3	677 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SKA1	Q96BD8	255 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	ATG4C	Q96DT6	458 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	TBCB	Q99426	244 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CPNE1	Q99829	537 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SLC24A3	Q9HC58	644 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PXMP2	Q9NR77	195 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	PLA2G6	O60733	806 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	NQO1	P15559	274 aa	Known RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	CCT8	P50990	548 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	RPS7	P62081	194 aa	Known RBP	9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	SKP1	P63208	163 aa		9.26	□□□□□ -0.93
ECHDC2-222	ENST00000539680	C1QBP	Q07021	282 aa	Known RBP	9.26	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms