RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 KLHL30Q0D2K2 578 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 TBX2Q13207 712 aaPredicted RBP13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 TDGQ13569 410 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 CLEC16AQ2KHT3 1053 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 BSPRYQ5W0U4 402 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 OR6B2Q6IFH4 312 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 TRIM72Q6ZMU5 477 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 FAM183BPQ6ZVS7 135 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 ZNF571Q7Z3V5 609 aaPredicted RBP13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 ERICH1Q86X53 443 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 MFSD6LQ8IWD5 586 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 CELF5Q8N6W0 485 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 TTC16Q8NEE8 873 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 SLC30A5Q8TAD4 765 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 IPO4Q8TEX9 1081 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 EDEM1Q92611 657 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 SYN2Q92777 582 aaPredicted RBP13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 E2F7Q96AV8 911 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 MRFAP1L1Q96HT8 127 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 PIWIL1Q96J94 861 aaKnown RBP13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 NACA2Q9H009 215 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 KIF9Q9HAQ2 790 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 SMPD4Q9NXE4 827 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 OBP2AQ9NY56 170 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 ARHGAP26Q9UNA1 814 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 SORCS3Q9UPU3 1222 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 COL4A2P08572 1712 aa13.33□□□□□ -0.28
TSPAN9-207ENST00000539631 LTFP02788 710 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 FYNP06241 537 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 ATP5C1P36542 298 aaKnown RBP13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 GABRB2P47870 512 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 USP4Q13107 963 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 ZNF77Q15935 545 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 C10orf120Q5SQS8 335 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 HGSNATQ68CP4 663 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 ZNF276Q8N554 614 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 SH3RF2Q8TEC5 729 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 DEPDC1BQ8WUY9 529 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 FAM149B1Q96BN6 582 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 C18orf8Q96DM3 657 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 ZFRQ96KR1 1074 aaKnown RBP13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 SYNCQ9H7C4 482 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 GKN1Q9NS71 199 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 ABCC13Q9NSE7 274 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 RASAL2Q9UJF2 1139 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 DUSP12Q9UNI6 340 aa13.32□□□□□ -0.28
TSPAN9-207ENST00000539631 TNFRSF10AO00220 468 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 LEFTY2O00292 366 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 SART1O43290 800 aaKnown RBP13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 SERPING1P05155 500 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 TPM1P09493 284 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 IRF1P10914 325 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 TCF3P15923 654 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 PSMC3P17980 439 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 GDI1P31150 447 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 ADKP55263 362 aaKnown RBP13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 SNX16P57768 344 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 GPC5P78333 572 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 CENPCQ03188 943 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 EFEMP1Q12805 493 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 TAF5Q15542 800 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 TDRD12Q587J7 1177 aaKnown RBP13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 KLHDC10Q6PID8 442 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 OLFML1Q6UWY5 402 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 MMS22LQ6ZRQ5 1243 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 RSRC2Q7L4I2 434 aaKnown RBP13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 XYLT1Q86Y38 959 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 YAF2Q8IY57 180 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 MSANTD4Q8NCY6 345 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 RNF139Q8WU17 664 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 GOLGA1Q92805 767 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 WBP2Q969T9 261 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 ZFYVE19Q96K21 471 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 TRMT61BQ9BVS5 477 aaKnown RBP13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 KLF16Q9BXK1 252 aaPredicted RBP13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 SFMBT1Q9UHJ3 866 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 DNMT3LQ9UJW3 386 aa13.31□□□□□ -0.28
TSPAN9-207ENST00000539631 DDX3XO00571 662 aaKnown RBP eCLIP13.3□□□□□ -0.286e-7■■■■■ 27.5
TSPAN9-207ENST00000539631 ZNF263O14978 683 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 MFAP3LO75121 409 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 GRAP2O75791 330 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 SRFP11831 508 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 NCAM1P13591 858 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 MMP8P22894 467 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 HNRNPH3P31942 346 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 NSFP46459 744 aaKnown RBP13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 ZXDAP98168 799 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 SLC6A3Q01959 620 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 FCHO2Q0JRZ9 810 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 PTP4A2Q12974 167 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 ARID5BQ14865 1188 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 MTF1Q14872 753 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 EFHC1Q5JVL4 640 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 ACAD10Q6JQN1 1059 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 WDR59Q6PJI9 974 aa13.3□□□□□ -0.28
TSPAN9-207ENST00000539631 PHLDB2Q86SQ0 1253 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms