RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 RAPH1Q70E73 1250 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 XYLT1Q86Y38 959 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 EFCAB3Q8N7B9 438 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 PYDC1Q8WXC3 89 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 SLC7A3Q8WY07 619 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 TWNKQ96RR1 684 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 ZNF302Q9NR11 478 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 SLC17A6Q9P2U8 582 aa21.08■□□□□ 0.97
TMEM260-203ENST00000539559 SPECC1L-ADORA2AF8WAN1 911 aa21.08■□□□□ 0.96
TMEM260-203ENST00000539559 PEX10O60683 326 aa21.08■□□□□ 0.96
TMEM260-203ENST00000539559 APRTP07741 180 aa21.08■□□□□ 0.96
TMEM260-203ENST00000539559 ARL2P36404 184 aa21.08■□□□□ 0.96
TMEM260-203ENST00000539559 ZRSR2Q15696 482 aaKnown RBP21.08■□□□□ 0.96
TMEM260-203ENST00000539559 PIWIL1Q96J94 861 aaKnown RBP21.08■□□□□ 0.96
TMEM260-203ENST00000539559 GBP5Q96PP8 586 aa21.08■□□□□ 0.96
TMEM260-203ENST00000539559 DHX33Q9H6R0 707 aaKnown RBP21.08■□□□□ 0.96
TMEM260-203ENST00000539559 KCNK4Q9NYG8 393 aa21.08■□□□□ 0.96
TMEM260-203ENST00000539559 CPSF2Q9P2I0 782 aaKnown RBP21.08■□□□□ 0.96
TMEM260-203ENST00000539559 DOCK1Q14185 1865 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 DKC1O60832 514 aaKnown RBP eCLIP21.07■□□□□ 0.96
TMEM260-203ENST00000539559 OATP04181 439 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 C6orf222P0C671 652 aaPredicted RBP21.07■□□□□ 0.96
TMEM260-203ENST00000539559 C16orf46Q6P387 395 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 MFN1Q8IWA4 741 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 ARHGAP24Q8N264 748 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 MPP5Q8N3R9 675 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 HIPK4Q8NE63 616 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 A8MXQ7 604 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 CIB2O75838 187 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 TM7SF2O76062 418 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 TRUB2O95900 331 aaKnown RBP21.07■□□□□ 0.96
TMEM260-203ENST00000539559 PIGRP01833 764 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 SNRPAP09012 282 aaKnown RBP21.07■□□□□ 0.96
TMEM260-203ENST00000539559 TAZQ16635 292 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 UNC5BQ8IZJ1 945 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 NDUFAF2Q8N183 169 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 NSUN6Q8TEA1 469 aaKnown RBP21.07■□□□□ 0.96
TMEM260-203ENST00000539559 APOL6Q9BWW8 343 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 ZNF518BQ9C0D4 1074 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 NDE1Q9NXR1 346 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 TAGLN3Q9UI15 199 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 ANGPTL2Q9UKU9 493 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 NR2E3Q9Y5X4 410 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 MAD1L1Q9Y6D9 718 aa21.07■□□□□ 0.96
TMEM260-203ENST00000539559 MAGEC1O60732 1142 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 RBL1P28749 1068 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 CDH5P33151 784 aaPredicted RBP21.06■□□□□ 0.96
TMEM260-203ENST00000539559 TEX44Q53QW1 395 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 WDR49Q8IV35 697 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 CMASQ8NFW8 434 aaPredicted RBP21.06■□□□□ 0.96
TMEM260-203ENST00000539559 UBA3Q8TBC4 463 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 MTBPQ96DY7 904 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 KLRG1Q96E93 195 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 ECSITQ9BQ95 431 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 EBF3Q9H4W6 596 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 SPON1Q9HCB6 807 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 PCDHGC3Q9UN70 934 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 EFR3BQ9Y2G0 817 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 ARHGAP42A6NI28 874 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 C19orf81C9J6K1 198 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 FAM189A1O60320 539 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 TOM1L1O75674 476 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 ETS2P15036 469 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 GMPRP36959 345 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 PDE1BQ01064 536 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 CDC16Q13042 620 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 PEX6Q13608 980 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 RALGPS1Q5JS13 557 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 TRNP1Q6NT89 227 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 CAND1Q86VP6 1230 aaKnown RBP21.06■□□□□ 0.96
TMEM260-203ENST00000539559 MYLK4Q86YV6 388 aaPredicted RBP21.06■□□□□ 0.96
TMEM260-203ENST00000539559 CCDC106Q9BWC9 280 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 POPDC2Q9HBU9 364 aa21.06■□□□□ 0.96
TMEM260-203ENST00000539559 HMX2A2RU54 273 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 RNASEH1O60930 286 aaKnown RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 KRT37O76014 449 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 RNF8O76064 485 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 HMGCS2P54868 508 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 YWHAEP62258 255 aaKnown RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 DSG1Q02413 1049 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 NOMO1Q15155 1222 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 DUOXA2Q1HG44 320 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 FAM102AQ5T9C2 384 aaPredicted RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 ISLR2Q6UXK2 745 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 PRPF31Q8WWY3 499 aaKnown RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 SDCBP2Q9H190 292 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 XYLT2Q9H1B5 865 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 ETAA1Q9NY74 926 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 ITM2AO43736 263 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 PDE5AO76074 875 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 POLR2BP30876 1174 aaKnown RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 GRIA1P42261 906 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 EPHB1P54762 984 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 ACTR3P61158 418 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 LPCAT4Q643R3 524 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 NET1Q7Z628 596 aaPredicted RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 TMEM192Q8IY95 271 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 CCDC124Q96CT7 223 aaKnown RBP21.05■□□□□ 0.96
TMEM260-203ENST00000539559 C12orf42Q96LP6 360 aa21.05■□□□□ 0.96
TMEM260-203ENST00000539559 WWP1Q9H0M0 922 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms