RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 NME8Q8N427 588 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 MZB1Q8WU39 189 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 DCAKDQ8WVC6 231 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 SNX25Q9H3E2 840 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 TMEM51Q9NW97 253 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 Q9Y3F1 56 aa18.65■□□□□ 0.58
GNE-204ENST00000539208 A0A1W2PPM1 405 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 SPTLC1O15269 473 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 KCNN4O15554 427 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 ZWINTO95229 277 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 L1CAMP32004 1257 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 RPA3P35244 121 aaPredicted RBP18.64■□□□□ 0.57
GNE-204ENST00000539208 ELK3P41970 407 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 MSH2P43246 934 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 NRLP54845 237 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 PDK4Q16654 411 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 SV2CQ496J9 727 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 GALNTL6Q49A17 601 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 CGB2Q6NT52 195 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 TAB3Q8N5C8 712 aaPredicted RBP18.64■□□□□ 0.57
GNE-204ENST00000539208 APPL2Q8NEU8 664 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 ALKBH8Q96BT7 664 aaKnown RBP18.64■□□□□ 0.57
GNE-204ENST00000539208 LPIN3Q9BQK8 851 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 APOL6Q9BWW8 343 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 PITPNM3Q9BZ71 974 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 NRDE2Q9H7Z3 1164 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 PNPLA8Q9NP80 782 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 HAUS2Q9NVX0 235 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.64■□□□□ 0.57
GNE-204ENST00000539208 STARD13Q9Y3M8 1113 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 PDGFRBP09619 1106 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 FAM163BP0C2L3 166 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 CCDC130P13994 396 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 CA4P22748 312 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 LMO2P25791 158 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 NR2C2P49116 596 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 SUGP1Q8IWZ8 645 aaKnown RBP18.64■□□□□ 0.57
GNE-204ENST00000539208 C4orf33Q8N1A6 199 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 RAB6BQ9NRW1 208 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 ABCF3Q9NUQ8 709 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 FLRT1Q9NZU1 646 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 HEY1Q9Y5J3 304 aa18.64■□□□□ 0.57
GNE-204ENST00000539208 TREHO43280 583 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 ATP2C2O75185 946 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 ZBED1O96006 694 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 RBL1P28749 1068 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 ADORA2BP29275 332 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 EFTUD2Q15029 972 aaKnown RBP eCLIP18.63■□□□□ 0.57
GNE-204ENST00000539208 RNF43Q68DV7 783 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 IGDCC3Q8IVU1 814 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 CDKL3Q8IVW4 592 aaPredicted RBP18.63■□□□□ 0.57
GNE-204ENST00000539208 TNIP3Q96KP6 325 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 RNF39Q9H2S5 420 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 CPA4Q9UI42 421 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 CHMP2BQ9UQN3 213 aa18.63■□□□□ 0.57
GNE-204ENST00000539208 HCRTO43612 131 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 KRT4P19013 534 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 TFE3P19532 575 aaPredicted RBP18.62■□□□□ 0.57
GNE-204ENST00000539208 WARSP23381 471 aaKnown RBP18.62■□□□□ 0.57
GNE-204ENST00000539208 CYP2F1P24903 491 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 HOXC8P31273 242 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 GBP2P32456 591 aaPredicted RBP18.62■□□□□ 0.57
GNE-204ENST00000539208 SF3A3Q12874 501 aaKnown RBP eCLIP18.62■□□□□ 0.57
GNE-204ENST00000539208 ZKSCAN8Q15776 578 aaPredicted RBP18.62■□□□□ 0.57
GNE-204ENST00000539208 EFHC1Q5JVL4 640 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 STRADAQ7RTN6 431 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 FUKQ8N0W3 1084 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 TOP6BLQ8N6T0 577 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 CLEC4CQ8WTT0 213 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 MRRFQ96E11 262 aaKnown RBP18.62■□□□□ 0.57
GNE-204ENST00000539208 PAIP2Q9BPZ3 127 aaKnown RBP18.62■□□□□ 0.57
GNE-204ENST00000539208 KATNAL1Q9BW62 490 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 KLC2Q9H0B6 622 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 KLC4Q9NSK0 619 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 KLK14Q9P0G3 267 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 HUS1O60921 280 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 SLC1A5Q15758 541 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 MCUQ8NE86 351 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 PRDM16Q9HAZ2 1276 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 ETNK2Q9NVF9 386 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 MTMR10Q9NXD2 777 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.62■□□□□ 0.57
GNE-204ENST00000539208 KLHL14Q9P2G3 628 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 IPPQ9Y573 584 aa18.62■□□□□ 0.57
GNE-204ENST00000539208 XPO1O14980 1071 aaKnown RBP18.61■□□□□ 0.57
GNE-204ENST00000539208 GCATO75600 419 aa18.61■□□□□ 0.57
GNE-204ENST00000539208 CELF2O95319 508 aaKnown RBP18.61■□□□□ 0.57
GNE-204ENST00000539208 LCP1P13796 627 aa18.61■□□□□ 0.57
GNE-204ENST00000539208 LRPAP1P30533 357 aa18.61■□□□□ 0.57
GNE-204ENST00000539208 SOX4Q06945 474 aaPredicted RBP18.61■□□□□ 0.57
GNE-204ENST00000539208 PPP6R3Q5H9R7 873 aaPredicted RBP18.61■□□□□ 0.57
GNE-204ENST00000539208 PSTKQ8IV42 348 aaKnown RBP18.61■□□□□ 0.57
GNE-204ENST00000539208 SMG8Q8ND04 991 aaKnown RBP18.61■□□□□ 0.57
GNE-204ENST00000539208 SLC2A14Q8TDB8 520 aa18.61■□□□□ 0.57
GNE-204ENST00000539208 SLC44A1Q8WWI5 657 aa18.61■□□□□ 0.57
GNE-204ENST00000539208 HNRNPABQ99729 332 aaKnown RBP18.61■□□□□ 0.57
GNE-204ENST00000539208 ADAM33Q9BZ11 813 aa18.61■□□□□ 0.57
GNE-204ENST00000539208 AP5M1Q9H0R1 490 aa18.61■□□□□ 0.57
GNE-204ENST00000539208 RXFP1Q9HBX9 757 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms