RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 PRKG1Q13976 671 aa12.86□□□□□ -0.35
USP3-203ENST00000538686 CDONQ4KMG0 1287 aa12.86□□□□□ -0.35
USP3-203ENST00000538686 DCAF17Q5H9S7 520 aaPredicted RBP12.86□□□□□ -0.35
USP3-203ENST00000538686 NXNQ6DKJ4 435 aa12.86□□□□□ -0.35
USP3-203ENST00000538686 HIPK4Q8NE63 616 aa12.86□□□□□ -0.35
USP3-203ENST00000538686 THG1LQ9NWX6 298 aaKnown RBP12.86□□□□□ -0.35
USP3-203ENST00000538686 PCDHA2Q9Y5H9 948 aa12.86□□□□□ -0.35
USP3-203ENST00000538686 DIP2BQ9P265 1576 aa12.86□□□□□ -0.35
USP3-203ENST00000538686 CDK2AP1O14519 115 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 ACOX3O15254 700 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 CLPXO76031 633 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 FTLP02792 175 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 EIF2AK2P19525 551 aaKnown RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 SCNN1DP51172 638 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TPTEP56180 551 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 PEX3P56589 373 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 BASP1P80723 227 aaKnown RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 SLC18A2Q05940 514 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 GALNT2Q10471 571 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 LETM2Q2VYF4 491 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TAS2R42Q7RTR8 314 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 DEFB107AQ8IZN7 70 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 SIX6OS1Q8N1H7 587 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 MYO1HQ8N1T3 1032 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TTC30BQ8N4P2 665 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 ETNPPLQ8TBG4 499 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 OSCP1Q8WVF1 389 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TRIM63Q969Q1 353 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 ACAP3Q96P50 834 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 AIFM2Q9BRQ8 373 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 HMG20AQ9NP66 347 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 ARHGAP26Q9UNA1 814 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 PCDHGA3Q9Y5H0 932 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 A0A1W2PPW3 197 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 FADS2P1A8MWK0 482 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 FAM155AB1AL88 458 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 E9PMD0 336 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 F5H6K3 240 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 J3QRK9 145 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 PSMD11O00231 422 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 RNF103O00237 685 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 HAT1O14929 419 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 DYNC1LI2O43237 492 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 MSI1O43347 362 aaKnown RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 PRKAB2O43741 272 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 COL1A1P02452 1464 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 HSPA1AP0DMV8 641 aaKnown RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 HSPA1BP0DMV9 641 aaKnown RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 KRT3P12035 628 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 KLRC2P26717 231 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 NT5C2P49902 561 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 C19orf57Q0VDD7 668 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 GRSF1Q12849 480 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP3-203ENST00000538686 BNIP3Q12983 259 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 NFE2Q16621 373 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 HSF5Q4G112 596 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 TCHHL1Q5QJ38 904 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 PPM1LQ5SGD2 360 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 LMBRD2Q68DH5 695 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 AKAP14Q86UN6 197 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 HPS6Q86YV9 775 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 GALNT13Q8IUC8 556 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 KSR1Q8IVT5 923 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 COLGALT2Q8IYK4 626 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 LCORLQ8N3X6 602 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TRIB2Q92519 343 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 FBXL8Q96CD0 374 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TXNDC15Q96J42 360 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 ANO3Q9BYT9 981 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 OR2B2Q9GZK3 357 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 ZFYVE28Q9HCC9 887 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 MAGEE1Q9HCI5 957 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 XAB2Q9HCS7 855 aaKnown RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 CCDC177Q9NQR7 707 aaPredicted RBP12.85□□□□□ -0.35
USP3-203ENST00000538686 ANLNQ9NQW6 1124 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 OLAHQ9NV23 265 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 GDAP2Q9NXN4 497 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 BARHL2Q9NY43 387 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 TAS2R14Q9NYV8 317 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 HACD3Q9P035 362 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 SHOC2Q9UQ13 582 aa12.85□□□□□ -0.35
USP3-203ENST00000538686 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
USP3-203ENST00000538686 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 MINDY4BA8MYZ0 360 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 B8ZZF3 427 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 CLDN25C9JDP6 229 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 PDXKO00764 312 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 BCL10O95999 233 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 GZMAP12544 262 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 CTRB1P17538 263 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 CCNA2P20248 432 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 ITGAXP20702 1163 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 ENPP1P22413 925 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 CXCR2P25025 360 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 IGBP1P78318 339 aa12.84□□□□□ -0.35
USP3-203ENST00000538686 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
USP3-203ENST00000538686 UBAP2LQ14157 1087 aaKnown RBP12.84□□□□□ -0.35
USP3-203ENST00000538686 ARHGAP44Q17R89 818 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms