RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 TLR3O15455 904 aaKnown RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 KRT37O76014 449 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 RGS20O76081 388 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PGM3O95394 542 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 CDK4P11802 303 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 KRT10P13645 584 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 FOSL1P15407 271 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PEX2P28328 305 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 SERPINB6P35237 376 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 FDFT1P37268 417 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 HALP42357 657 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 BPIFB3P59826 476 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ARHGAP8P85298 464 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 GTF2BQ00403 316 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PDE1BQ01064 536 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 C1QBPQ07021 282 aaKnown RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 BST1Q10588 318 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 TMED1Q13445 227 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 VPS72Q15906 364 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 SH2D5Q6ZV89 423 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 METTL3Q86U44 580 aaKnown RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 TMEM126BQ8IUX1 230 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 RTKN2Q8IZC4 609 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 NAT8LQ8N9F0 302 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 TTC13Q8NBP0 860 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 FEZF2Q8TBJ5 459 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 SERAC1Q96JX3 654 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 FRMD6Q96NE9 622 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 FAM96AQ9H5X1 160 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 NYAP2Q9P242 653 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ADAMTS6Q9UKP5 1117 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ITGA11Q9UKX5 1188 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 SSUH2Q9Y2M2 353 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PRKAB1Q9Y478 270 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 DTNAQ9Y4J8 743 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 TELO2Q9Y4R8 837 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 SLX4Q8IY92 1834 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 BIRC5O15392 142 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 TFAP2AP05549 437 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ADRB2P07550 413 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ACAT1P24752 427 aaKnown RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 YY1P25490 414 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 NOS2P35228 1153 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 STT3AP46977 705 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 COPAP53621 1224 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 NCKAP1LP55160 1127 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 GRAPQ13588 217 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 KRT81Q14533 505 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 USH1GQ495M9 461 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 MDH1BQ5I0G3 518 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 FNBP1LQ5T0N5 605 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 OGFRL1Q5TC84 451 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 MFSD7Q6UXD7 560 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PHF13Q86YI8 300 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 CCDC33Q8N5R6 958 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 GRAPLQ8TC17 118 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ACTRT2Q8TDY3 377 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 GAB3Q8WWW8 586 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 CPT1BQ92523 772 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ABTB1Q969K4 478 aaPredicted RBP9.36□□□□□ -0.91
SNHG1-209ENST00000538654 LXNQ9BS40 222 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ZNF696Q9H7X3 374 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PCDH18Q9HCL0 1135 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 GINM1Q9NU53 330 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 SIRPGQ9P1W8 387 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PADI4Q9UM07 663 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 EFR3BQ9Y2G0 817 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 PLLPQ9Y342 182 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
SNHG1-209ENST00000538654 hCG_1818297A0A087WSY0 165 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 SDR42E2A6NKP2 422 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 TISP43B9A030 160 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 PI4K2BG5E9Z4 385 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 BANF1O75531 89 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 IDO1P14902 403 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 HSPA13P48723 471 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 BTKQ06187 659 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 CBX3Q13185 183 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 CCNIQ14094 377 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 BBS9Q3SYG4 887 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 NADK2Q4G0N4 442 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 CFAP161Q6P656 301 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 PGM2L1Q6PCE3 622 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 POTEAQ6S8J7 498 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 ARCQ7LC44 396 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 HAUS6Q7Z4H7 955 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 NUDCD3Q8IVD9 361 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 SLC35B2Q8TB61 432 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 TAS1R2Q8TE23 839 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 CCDC127Q96BQ5 260 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 PAWRQ96IZ0 340 aaKnown RBP9.35□□□□□ -0.91
SNHG1-209ENST00000538654 TMEM121Q9BTD3 319 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 TEKT3Q9BXF9 490 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 RBM38Q9H0Z9 239 aaKnown RBP9.35□□□□□ -0.91
SNHG1-209ENST00000538654 ABCG4Q9H172 646 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 ITGB1BP2Q9UKP3 347 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 HBS1LQ9Y450 684 aaKnown RBP9.35□□□□□ -0.91
SNHG1-209ENST00000538654 DAGLAQ9Y4D2 1042 aa9.35□□□□□ -0.91
SNHG1-209ENST00000538654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.35□□□□□ -0.91
SNHG1-209ENST00000538654 E5RJQ4 531 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms