RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 TRMT112Q9UI30 125 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 ITGA11Q9UKX5 1188 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 DNM3Q9UQ16 869 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ZNF652Q9Y2D9 606 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 R3HDM2Q9Y2K5 976 aaKnown RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 MAD1L1Q9Y6D9 718 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 ASTN2O75129 1339 aaPredicted RBP6.98□□□□□ -1.29
USP28-207ENST00000538475 IGSF9BQ9UPX0 1349 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 CROCCQ5TZA2 2017 aa6.98□□□□□ -1.29
USP28-207ENST00000538475 IQANK1A0A1B0GTG1 560 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 EIF4E1BA6NMX2 242 aaKnown RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 ANKRD63C9JTQ0 380 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 F5H6K3 240 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 H3BRJ5 948 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 I3L4J1 428 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ADAMTS3O15072 1205 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 AKAP3O75969 853 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ALX3O95076 343 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 TFAP2AP05549 437 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 SMIM18P0DKX4 95 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 VEGFAP15692 232 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 KLRC2P26717 231 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 GCAP28676 217 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 PTPN7P35236 360 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 FDFT1P37268 417 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 IL6STP40189 918 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 TFAP4Q01664 338 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 SLC18A2Q05940 514 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 WASHC5Q12768 1159 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 PPP2R5CQ13362 524 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 SLC1A5Q15758 541 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 HLFQ16534 295 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 NKAPLQ5M9Q1 402 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 STXBP5Q5T5C0 1151 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 IZUMO3Q5VZ72 239 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 CIAPIN1Q6FI81 312 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 PGM2L1Q6PCE3 622 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ADAMTSL4Q6UY14 1074 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 RBM44Q6ZP01 1051 aaKnown RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 ZNF410Q86VK4 478 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 C12orf56Q8IXR9 622 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ZNF444Q8N0Y2 327 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 CCDC33Q8N5R6 958 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 TMEM102Q8N9M5 508 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 BANPQ8N9N5 519 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ATP11CQ8NB49 1132 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 GALNT11Q8NCW6 608 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ZCRB1Q8TBF4 217 aaKnown RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 ETNPPLQ8TBG4 499 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ZNF564Q8TBZ8 553 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 DTX3LQ8TDB6 740 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 SNRNP27Q8WVK2 155 aaKnown RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 STON2Q8WXE9 905 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 KRT35Q92764 455 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ABHD8Q96I13 439 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 DYDC2Q96IM9 177 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 HHIPQ96QV1 700 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 PANX3Q96QZ0 392 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ANO3Q9BYT9 981 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 FRMD8Q9BZ67 464 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 OSBPL6Q9BZF3 934 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 INO80BQ9C086 356 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 GPR88Q9GZN0 384 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 KLC2Q9H0B6 622 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 INTS2Q9H0H0 1204 aaKnown RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 EBF3Q9H4W6 596 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 KCNK13Q9HB14 408 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ZFYVE28Q9HCC9 887 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 MLXIPLQ9NP71 852 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 TBC1D23Q9NUY8 699 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 RHBDL2Q9NX52 303 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 IGSF9Q9P2J2 1179 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 HERC5Q9UII4 1024 aaKnown RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 STRIP2Q9ULQ0 834 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 FAF1Q9UNN5 650 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 FRMD4BQ9Y2L6 1034 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 TMEM98Q9Y2Y6 226 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 NUMBLQ9Y6R0 609 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 GREB1LQ9C091 1923 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 MYO3BQ8WXR4 1341 aa6.97□□□□□ -1.29
USP28-207ENST00000538475 ZNF335Q9H4Z2 1342 aaPredicted RBP6.97□□□□□ -1.29
USP28-207ENST00000538475 PLIN4Q96Q06 1357 aa6.96□□□□□ -1.29
USP28-207ENST00000538475 C15orf38-AP3S2A0A0A6YYH1 394 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 HTR3EA5X5Y0 456 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 NFKBIEO00221 500 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 DYRK3O43781 588 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 MARCH6O60337 910 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 SERPINB7O75635 380 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 CETPP11597 493 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 PLS3P13797 630 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ZNF23P17027 643 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 CHRNB2P17787 502 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ABCB4P21439 1286 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 RPA1P27694 616 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 ADSSP30520 456 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 HOXD12P35452 270 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 COPB2P35606 906 aa6.96□□□□□ -1.3
USP28-207ENST00000538475 MAGEA10P43363 369 aaPredicted RBP6.96□□□□□ -1.3
USP28-207ENST00000538475 ARL4DP49703 201 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms