RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 RNF43Q68DV7 783 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 SPOPLQ6IQ16 392 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 KRBA2Q6ZNG9 492 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 CLEC20AQ6ZU45 233 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 HTR3DQ70Z44 454 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 CYP2U1Q7Z449 544 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 TADA2BQ86TJ2 420 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 BBS7Q8IWZ6 715 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 ALLCQ8N6M5 410 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 TERB1Q8NA31 727 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 CDK5RAP1Q96SZ6 601 aaKnown RBP9.13□□□□□ -0.95
DDB1-212ENST00000538470 TMEM8AQ9HCN3 771 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.13□□□□□ -0.953e-7■■■■□ 21.9
DDB1-212ENST00000538470 DEC1Q9P2X7 70 aa9.13□□□□□ -0.95
DDB1-212ENST00000538470 CHORDC1Q9UHD1 332 aaPredicted RBP9.13□□□□□ -0.95
DDB1-212ENST00000538470 CKAP5Q14008 2032 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 USP24Q9UPU5 2620 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 HHLA1C9JL84 531 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 SGK1O00141 431 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 SCAMP3O14828 347 aaKnown RBP9.12□□□□□ -0.95
DDB1-212ENST00000538470 TM4SF5O14894 197 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 DCLK1O15075 740 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 CACNG3O60359 315 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 TULP3O75386 442 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 BEST1O76090 585 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 PRR29P0C7W0 189 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 TRIM49P0CI25 452 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 TRIM49CP0CI26 452 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 IRF1P10914 325 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 ADORA2BP29275 332 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 HOXD12P35452 270 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 TIE1P35590 1138 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 SLC6A11P48066 632 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 GCLMP48507 274 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 MXI1P50539 228 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 MESP2Q0VG99 397 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 ORC1Q13415 861 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 KRT39Q6A163 491 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 GRAMD4Q6IC98 578 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 TMEM92Q6UXU6 159 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 LPCAT2Q7L5N7 544 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 GPRIN1Q7Z2K8 1008 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 CCDC186Q7Z3E2 898 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 ZNF276Q8N554 614 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 CCDC33Q8N5R6 958 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 C12orf29Q8N999 325 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 TXNDC5Q8NBS9 432 aaKnown RBP9.12□□□□□ -0.95
DDB1-212ENST00000538470 TAS1R2Q8TE23 839 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 CYFIP2Q96F07 1278 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 CNTNAP3BQ96NU0 1288 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 XPO6Q96QU8 1125 aaKnown RBP9.12□□□□□ -0.95
DDB1-212ENST00000538470 TWNKQ96RR1 684 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 KLF16Q9BXK1 252 aaPredicted RBP9.12□□□□□ -0.95
DDB1-212ENST00000538470 CNTNAP3Q9BZ76 1288 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 APOBEC3GQ9HC16 384 aaKnown RBP9.12□□□□□ -0.95
DDB1-212ENST00000538470 RMND1Q9NWS8 449 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 BCCIPQ9P287 314 aaKnown RBP eCLIP9.12□□□□□ -0.95
DDB1-212ENST00000538470 WDR35Q9P2L0 1181 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 EVLQ9UI08 416 aaPredicted RBP9.12□□□□□ -0.95
DDB1-212ENST00000538470 ZDHHC9Q9Y397 364 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 STARD13Q9Y3M8 1113 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 CACNA1EQ15878 2313 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 GON4LQ3T8J9 2241 aa9.12□□□□□ -0.95
DDB1-212ENST00000538470 ASCC3Q8N3C0 2202 aaKnown RBP9.12□□□□□ -0.95
DDB1-212ENST00000538470 TCRBV21S2A2A0A5A6 115 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 LNP1A1A4G5 178 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 TBC1D3BA6NDS4 549 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 NEDD8-MDP1E9PL57 170 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 KHNYNO15037 678 aaKnown RBP9.11□□□□□ -0.95
DDB1-212ENST00000538470 SLC16A3O15427 465 aaKnown RBP9.11□□□□□ -0.95
DDB1-212ENST00000538470 CYP26A1O43174 497 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 GREM1O60565 184 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ADAM23O75077 832 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 EPB41P11171 864 aaKnown RBP9.11□□□□□ -0.95
DDB1-212ENST00000538470 HNRNPLP14866 589 aaKnown RBP eCLIP9.11□□□□□ -0.95
DDB1-212ENST00000538470 ACO1P21399 889 aaKnown RBP9.11□□□□□ -0.95
DDB1-212ENST00000538470 BCKDHBP21953 392 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 PMLP29590 882 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 NTSR1P30989 418 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 KIF11P52732 1056 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 PPP3CAQ08209 521 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ADAM9Q13443 819 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 BECN1Q14457 450 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ANO4Q32M45 955 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 COBLL1Q53SF7 1204 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 C10orf76Q5T2E6 689 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 DAB2IPQ5VWQ8 1189 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 TCEAL6Q6IPX3 200 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 TTC30AQ86WT1 665 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 SFTPA1Q8IWL2 248 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ARHGAP18Q8N392 663 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ZNF513Q8N8E2 541 aaPredicted RBP9.11□□□□□ -0.95
DDB1-212ENST00000538470 FBXL13Q8NEE6 735 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 TCEAL3Q969E4 200 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 ELMO3Q96BJ8 720 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 LSM14BQ9BX40 385 aaKnown RBP9.11□□□□□ -0.95
DDB1-212ENST00000538470 BBS2Q9BXC9 721 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 GTPBP4Q9BZE4 634 aaKnown RBP9.11□□□□□ -0.95
DDB1-212ENST00000538470 SMOC1Q9H4F8 434 aa9.11□□□□□ -0.95
DDB1-212ENST00000538470 RXFP3Q9NSD7 469 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms