RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 DLG4P78352 724 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 GPS1Q13098 491 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 MRPL49Q13405 166 aaKnown RBP9.83□□□□□ -0.84
CD9-207ENST00000538418 UBXN2BQ14CS0 331 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 BAK1Q16611 211 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 AGBL4Q5VU57 503 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 SYT13Q7L8C5 426 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 KRT27Q7Z3Y8 459 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 LDHDQ86WU2 507 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 ARMC8Q8IUR7 673 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 NGEFQ8N5V2 710 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 AGBL5Q8NDL9 886 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 TBC1D22AQ8WUA7 517 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 RPL10LQ96L21 214 aaKnown RBP9.83□□□□□ -0.84
CD9-207ENST00000538418 KLHL32Q96NJ5 620 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 NOX5Q96PH1 765 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 CARD11Q9BXL7 1154 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 PLSCR4Q9NRQ2 329 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 CDY1Q9Y6F8 540 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 RALGAPBQ86X10 1494 aa9.83□□□□□ -0.84
CD9-207ENST00000538418 PNMA6EA0A0J9YXQ4 647 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 CDHR4A6H8M9 788 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 TOR1BO14657 336 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 TFRCP02786 760 aaKnown RBP9.82□□□□□ -0.84
CD9-207ENST00000538418 SERPINA4P29622 427 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 HOXD13P35453 343 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 RRADP55042 308 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 SRSF3P84103 164 aaKnown RBP9.82□□□□□ -0.84
CD9-207ENST00000538418 GALNT2Q10471 571 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 CUL4AQ13619 759 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 IQCB1Q15051 598 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 ZNF792Q3KQV3 632 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 MGAT5BQ3V5L5 792 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 CTXN3Q4LDR2 81 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 REXO1L1PQ8IX06 675 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 KCNN1Q92952 543 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 SLC46A2Q9BY10 475 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 ZNF552Q9H707 407 aaPredicted RBP9.82□□□□□ -0.84
CD9-207ENST00000538418 KCND3Q9UK17 655 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 PCDHA5Q9Y5H7 936 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 DLC1Q96QB1 1528 aa9.82□□□□□ -0.84
CD9-207ENST00000538418 KIF1AQ12756 1690 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 VWA3AA6NCI4 1184 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 P4HA2O15460 535 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 PTP4A3O75365 173 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 RASAL1O95294 804 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 ITGB2P05107 769 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 RBM5P52756 815 aaKnown RBP eCLIP9.81□□□□□ -0.84
CD9-207ENST00000538418 INSM1Q01101 510 aaPredicted RBP9.81□□□□□ -0.84
CD9-207ENST00000538418 GPR68Q15743 365 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 FYB2Q5VWT5 728 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 ABLIM2Q6H8Q1 611 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 PDPRQ8NCN5 879 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 FLAD1Q8NFF5 587 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 ZBTB8AQ96BR9 441 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 SLC46A1Q96NT5 459 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 TTYH3Q9C0H2 523 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 NFKBIL1Q9UBC1 381 aaPredicted RBP9.81□□□□□ -0.84
CD9-207ENST00000538418 CNTN6Q9UQ52 1028 aa9.81□□□□□ -0.84
CD9-207ENST00000538418 STX16-NPEPL1H3BU86 382 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 STX16O14662 325 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 DCLK1O15075 740 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 ADAM23O75077 832 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 VPS4BO75351 444 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 SGPL1O95470 568 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 DNTTP04053 509 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 TGM1P22735 817 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 ZBED6P86452 979 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 KRT17Q04695 432 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 EIF4A2Q14240 407 aaKnown RBP9.8□□□□□ -0.84
CD9-207ENST00000538418 PRR31Q5SQ13 230 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 ANKS6Q68DC2 871 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 RINLQ6ZS11 566 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 USP30Q70CQ3 517 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.8□□□□□ -0.84
CD9-207ENST00000538418 ZNF280BQ86YH2 543 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 TP53INP2Q8IXH6 220 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 TTC30BQ8N4P2 665 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 FITM2Q8N6M3 262 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 TBC1D15Q8TC07 691 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 CREB3L4Q8TEY5 395 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 FNIP1Q8TF40 1166 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 ZMAT2Q96NC0 199 aaKnown RBP9.8□□□□□ -0.84
CD9-207ENST00000538418 FSCN3Q9NQT6 498 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 SHOC2Q9UQ13 582 aa9.8□□□□□ -0.84
CD9-207ENST00000538418 KNDC1Q76NI1 1749 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 B5MCH6 92 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 DHHO43323 396 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 TAF5LO75529 589 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 SCGB1D1O95968 90 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 SPINK2P20155 84 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 ACTN2P35609 894 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 PSMC2P35998 433 aaKnown RBP9.79□□□□□ -0.84
CD9-207ENST00000538418 PGM1P36871 562 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 NPEPPSP55786 919 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 RNASE9P60153 205 aaKnown RBP9.79□□□□□ -0.84
CD9-207ENST00000538418 SATB1Q01826 763 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 BOP1Q14137 746 aaKnown RBP9.79□□□□□ -0.84
CD9-207ENST00000538418 GALNTL6Q49A17 601 aa9.79□□□□□ -0.84
CD9-207ENST00000538418 SNX30Q5VWJ9 437 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms