RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 GJC2Q5T442 439 aaPredicted RBP11.55□□□□□ -0.56
LINC00346-201ENST00000538077 AGAP9Q5VTM2 703 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 MRNIPQ6NTE8 343 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 USP38Q8NB14 1042 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 PCYOX1LQ8NBM8 494 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 FHDC1Q9C0D6 1143 aaPredicted RBP11.55□□□□□ -0.56
LINC00346-201ENST00000538077 ERI2A8K979 691 aaKnown RBP11.55□□□□□ -0.56
LINC00346-201ENST00000538077 LACTBL1A8MY62 500 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 SLC26A4O43511 780 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 PSTPIP1O43586 416 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 GAS2O43903 313 aaKnown RBP11.55□□□□□ -0.56
LINC00346-201ENST00000538077 USP17L7P0C7H9 530 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 OR1E1P30953 314 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 SPG21Q9NZD8 308 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 PPIEQ9UNP9 301 aaKnown RBP11.55□□□□□ -0.56
LINC00346-201ENST00000538077 PCDHB5Q9Y5E4 795 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 PXDNLA1KZ92 1463 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 NR5A2O00482 541 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 PSEN2P49810 448 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 SLC29A2Q14542 456 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 FBXO47Q5MNV8 452 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 WDR49Q8IV35 697 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 RGL4Q8IZJ4 473 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 SYT15Q9BQS2 421 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 UBXN6Q9BZV1 441 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 EPN3Q9H201 632 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 HMX1Q9NP08 348 aaPredicted RBP11.55□□□□□ -0.56
LINC00346-201ENST00000538077 GID8Q9NWU2 228 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 DUSP10Q9Y6W6 482 aa11.55□□□□□ -0.56
LINC00346-201ENST00000538077 FAM205AQ6ZU69 1335 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 MEGF6O75095 1541 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 A0A1W2PQJ5 194 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 MANSC4A6NHS7 340 aaPredicted RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 WNT10BO00744 389 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 TARSP26639 723 aaKnown RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 TBX4P57082 545 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 BST2Q10589 180 aaKnown RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 LRRC23Q53EV4 343 aaPredicted RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 CCDC60Q8IWA6 550 aaPredicted RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 TAS1R2Q8TE23 839 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 RXFP2Q8WXD0 754 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 GRAMD1AQ96CP6 724 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 ZNF333Q96JL9 665 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 CNDP1Q96KN2 507 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 KIF2CQ99661 725 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 N6AMT1Q9Y5N5 214 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 SMNDC1O75940 238 aaKnown RBP eCLIP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 MT-CO1P00395 513 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 GSNP06396 782 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 CDH8P55286 799 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 BOP1Q14137 746 aaKnown RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 METTL7BQ6UX53 244 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 ZIM3Q96PE6 472 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 DDX28Q9NUL7 540 aaKnown RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 SSU72P8A0A1W2PR75 194 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 B2RBV5 119 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 FAM47E-STBD1D6RA91 191 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 PRR23D1E9PI22 279 aaPredicted RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 GLP2RO95838 553 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 PRR23D2P0DMB1 279 aaPredicted RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 GRK3P35626 688 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 TFDP3Q5H9I0 405 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 MTSS1LQ765P7 747 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 COLGALT1Q8NBJ5 622 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 VPS37AQ8NEZ2 397 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 CASKIN2Q8WXE0 1202 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 COPS5Q92905 334 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 IL17RAQ96F46 866 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 FAR2Q96K12 515 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 UBTFL6P0CB48 400 aaPredicted RBP11.54□□□□□ -0.56
LINC00346-201ENST00000538077 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 ERVK-24P63145 666 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 VGLL4Q14135 290 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 CES3Q6UWW8 571 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 GRIN3AQ8TCU5 1115 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 TMC2Q8TDI7 906 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 RHBGQ9H310 441 aa11.54□□□□□ -0.56
LINC00346-201ENST00000538077 IFRD1O00458 451 aaPredicted RBP11.53□□□□□ -0.56
LINC00346-201ENST00000538077 GJB6O95452 261 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 GSTM1P09488 218 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 IL1R1P14778 569 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 BDNFP23560 247 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ARHGEF19Q8IW93 802 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 SCUBE3Q8IX30 993 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ZSWIM1Q9BR11 485 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ADGRE3Q9BY15 652 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 NCOA3Q9Y6Q9 1424 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 DYRK3O43781 588 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ZNF682O95780 498 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 NFICP08651 508 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 ITGALP20701 1170 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 POU1F1P28069 291 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 SERPINB8P50452 374 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 PPP4CP60510 307 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 DAGLBQ8NCG7 672 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 MIR1-1HGQ9H1L0 117 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 OSGEPQ9NPF4 335 aa11.53□□□□□ -0.56
LINC00346-201ENST00000538077 TRPC4Q9UBN4 977 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms