RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 LMNAP02545 664 aaKnown RBP15.55■□□□□ 0.08
USP28-204ENST00000537642 RALAP11233 206 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 BRD2P25440 801 aaKnown RBP15.55■□□□□ 0.08
USP28-204ENST00000537642 PLA2G4AP47712 749 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 TKTL1P51854 596 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 DMWDQ09019 674 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 TPD52L1Q16890 204 aaPredicted RBP15.55■□□□□ 0.08
USP28-204ENST00000537642 C10orf120Q5SQS8 335 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 LY6G5CQ5SRR4 150 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 PM20D1Q6GTS8 502 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 HTR3DQ70Z44 454 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 BHLHA9Q7RTU4 235 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 SUMF1Q8NBK3 374 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 ATRIPQ8WXE1 791 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 NDRG1Q92597 394 aaKnown RBP15.55■□□□□ 0.08
USP28-204ENST00000537642 IPO9Q96P70 1041 aaKnown RBP15.55■□□□□ 0.08
USP28-204ENST00000537642 CRACR2AQ9BSW2 395 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 ULBP1Q9BZM6 244 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 THAP9Q9H5L6 903 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 DNMT3LQ9UJW3 386 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.55■□□□□ 0.08
USP28-204ENST00000537642 GPR179Q6PRD1 2367 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 OTOGLQ3ZCN5 2332 aa15.55■□□□□ 0.08
USP28-204ENST00000537642 EP300Q09472 2414 aaPredicted RBP15.54■□□□□ 0.08
USP28-204ENST00000537642 CHURC1-FNTBB4DL54 471 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 ZBED1O96006 694 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 ADH1CP00326 375 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 SETSIPP0DME0 302 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 ADH5P11766 374 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 SLC9A1P19634 815 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 ERCC5P28715 1186 aaPredicted RBP15.54■□□□□ 0.08
USP28-204ENST00000537642 MTIF2P46199 727 aaKnown RBP15.54■□□□□ 0.08
USP28-204ENST00000537642 SLC6A11P48066 632 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 NRLP54845 237 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 ADIGQ0VDE8 80 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 CNGA2Q16280 664 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 FBXO43Q4G163 708 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 C12orf40Q86WS4 652 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 LRRC4Q9HBW1 653 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 UBE2TQ9NPD8 197 aaPredicted RBP15.54■□□□□ 0.08
USP28-204ENST00000537642 POLR3BQ9NW08 1133 aaPredicted RBP15.54■□□□□ 0.08
USP28-204ENST00000537642 DACH1Q9UI36 760 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 CNTN6Q9UQ52 1028 aa15.54■□□□□ 0.08
USP28-204ENST00000537642 GABBR2O75899 941 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 FNTBP49356 437 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 YWHAGP61981 247 aaKnown RBP eCLIP15.53■□□□□ 0.08
USP28-204ENST00000537642 APBA1Q02410 837 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 GOLGA8FQ08AF8 430 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 GOLGA8DPQ0D2H9 430 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 MESP2Q0VG99 397 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 STILQ15468 1287 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 TRIM65Q6PJ69 517 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 GBP6Q6ZN66 633 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 TADA2BQ86TJ2 420 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 TMEM25Q86YD3 366 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 MIB1Q86YT6 1006 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 ARHGAP18Q8N392 663 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 RPLP0P6Q8NHW5 317 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 SLC35F5Q8WV83 523 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 KCTD13Q8WZ19 329 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 SECISBP2LQ93073 1101 aaKnown RBP15.53■□□□□ 0.08
USP28-204ENST00000537642 CDK5RAP1Q96SZ6 601 aaKnown RBP15.53■□□□□ 0.08
USP28-204ENST00000537642 SPHK2Q9NRA0 654 aa15.53■□□□□ 0.08
USP28-204ENST00000537642 MYO18AQ92614 2054 aaKnown RBP15.53■□□□□ 0.08
USP28-204ENST00000537642 CFAP54Q96N23 3096 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 GVINP1Q7Z2Y8 2422 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 GTPBP10A4D1E9 387 aaKnown RBP15.52■□□□□ 0.08
USP28-204ENST00000537642 ANTXRLA6NF34 631 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 K7EQS6 105 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 M0QYV0 167 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 HOXC11O43248 304 aaPredicted RBP15.52■□□□□ 0.08
USP28-204ENST00000537642 ATG13O75143 517 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 STC2O76061 302 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 KRT5P13647 590 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 HOXA6P31267 233 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 EIF2DP41214 584 aaKnown RBP15.52■□□□□ 0.08
USP28-204ENST00000537642 RGS7P49802 495 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 GAD2Q05329 585 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 EFEMP1Q12805 493 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 MAN2A1Q16706 1144 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 EXOC3L4Q17RC7 722 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 PMF1Q6P1K2 205 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 Q6ZNB5 142 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 RBM43Q6ZSC3 357 aaKnown RBP15.52■□□□□ 0.08
USP28-204ENST00000537642 FAM114A1Q8IWE2 563 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 SFTPA1Q8IWL2 248 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 ETFBKMTQ8IXQ9 262 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 PNKPQ96T60 521 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 EPC1Q9H2F5 836 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 RASAL2Q9UJF2 1139 aa15.52■□□□□ 0.08
USP28-204ENST00000537642 LSM7Q9UK45 103 aaKnown RBP15.52■□□□□ 0.08
USP28-204ENST00000537642 YJEFN3A6XGL0 299 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 E7ENQ6 273 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 LCP1P13796 627 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 PON1P27169 355 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 MFAP3P55082 362 aa15.51■□□□□ 0.07
USP28-204ENST00000537642 CT47A1Q5JQC4 288 aaPredicted RBP15.51■□□□□ 0.07
USP28-204ENST00000537642 MIIPQ5JXC2 388 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms