RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 NUMBLQ9Y6R0 609 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 TSC22D2O75157 780 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CALB1P05937 261 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SERPINA6P08185 405 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF23P17027 643 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NELFEP18615 380 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ALDH1A3P47895 512 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CDK8P49336 464 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NEDD8Q15843 81 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 FASTKD1Q53R41 847 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PADI6Q6TGC4 694 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 EFCAB3Q8N7B9 438 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 DENND1AQ8TEH3 1009 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SH3RF3Q8TEJ3 882 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 HEXIM2Q96MH2 286 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 FAM32AQ9Y421 112 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 H0YCG3 227 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PIK3R2O00459 728 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CYP27B1O15528 508 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CCNFP41002 786 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SESN2P58004 480 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 DPYSQ14117 519 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SPCS2Q15005 226 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SUZ12Q15022 739 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 WDR72Q3MJ13 1102 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ZC2HC1CQ53FD0 456 aaPredicted RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CIAPIN1Q6FI81 312 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 RIPOR1Q6ZS17 1223 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ULK2Q8IYT8 1036 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NEDD1Q8NHV4 660 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 CALML6Q8TD86 181 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 SLC20A1Q8WUM9 679 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PTCD3Q96EY7 689 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 NGRNQ9NPE2 291 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 PNPLA3Q9NST1 481 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 TDRKHQ9Y2W6 561 aaKnown RBP5.58□□□□□ -1.52
PTPRD-213ENST00000537002 ZNF536O15090 1300 aa5.58□□□□□ -1.52
PTPRD-213ENST00000537002 LINC00854A0A1B0GVQ3 168 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ANGPT2O15123 496 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 GDF11O95390 407 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SLC4A1P02730 911 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TFE3P19532 575 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 GTF2IP78347 998 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SLC25A3Q00325 362 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DRICH1Q6PGQ1 229 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 IQCF2Q8IXL9 164 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PPIL6Q8IXY8 311 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TCP10LQ8TDR4 215 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 STON2Q8WXE9 905 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TRPC7Q9HCX4 862 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DCP1AQ9NPI6 582 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TAS2R1Q9NYW7 299 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PCDHA3Q9Y5H8 950 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TRIM43BA6NCK2 446 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CENPBD1B2RD01 187 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MED7O43513 233 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PSTPIP1O43586 416 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 NOL4O94818 638 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 FAM163BP0C2L3 166 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PHKA2P46019 1235 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CCR3P51677 355 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ARHGDIAP52565 204 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 BTG3Q14201 252 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 C2CD6Q53TS8 623 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 GPATCH4Q5T3I0 446 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ARHGEF16Q5VV41 709 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MOXD1Q6UVY6 613 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ENOSF1Q7L5Y1 443 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 RNF148Q8N7C7 305 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 FAM71DQ8N9W8 422 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 RFWD2Q8NHY2 731 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CEP170P1Q96L14 293 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 OSBPL11Q9BXB4 747 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 YTHDF1Q9BYJ9 559 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MRPL11Q9Y3B7 192 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 SLC30A1Q9Y6M5 507 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MYH1P12882 1939 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MYH4Q9Y623 1939 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 NFIBO00712 420 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TBC1D4O60343 1298 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DDHD2O94830 711 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MSL3P1P0C860 447 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CDK4P11802 303 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 RPL10AP62906 217 aaKnown RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 CREB5Q02930 508 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 WASHC5Q12768 1159 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 LPCAT4Q643R3 524 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PALB2Q86YC2 1186 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 TMEM35BQ8NCS4 154 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 AGBL1Q96MI9 1066 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 PHF12Q96QT6 1004 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MSTO1Q9BUK6 570 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 WDR11Q9BZH6 1224 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 DCLK3Q9C098 648 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 ZMYND8Q9ULU4 1186 aaPredicted RBP5.57□□□□□ -1.52
PTPRD-213ENST00000537002 MYRFQ9Y2G1 1151 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 NFASCO94856 1347 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 FAM237BA0A1B0GVD1 139 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 FOXO6A8MYZ6 492 aa5.57□□□□□ -1.52
PTPRD-213ENST00000537002 HNRNPCL2B2RXH8 293 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms