RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 BRAFP15056 766 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 LMO2P25791 158 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 CST5P28325 142 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 PCSK1P29120 753 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 NOS2P35228 1153 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 ARL4AP40617 200 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 SOX4Q06945 474 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 TAF5Q15542 800 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 CCDC38Q502W7 563 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 UNC45BQ8IWX7 931 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 FAM71DQ8N9W8 422 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 PCSK9Q8NBP7 692 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 PGBD4Q96DM1 585 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 PIWIL1Q96J94 861 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 ZNF317Q96PQ6 595 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 TRIM62Q9BVG3 475 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 SAMD15Q9P1V8 674 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 PSMC3IPQ9P2W1 217 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 DSEQ9UL01 958 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 PDCD11Q14690 1871 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 SF3B1O75533 1304 aaKnown RBP eCLIP14.12□□□□□ -0.155e-6■■■■■ 39
SMG6-203ENST00000536871 GOLGA6L7A0A1B0GV03 622 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 TMEM120BA0PK00 339 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 FAM155AB1AL88 458 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 LCP1P13796 627 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 IL4RP24394 825 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 GDF10P55107 478 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 GEMIN4P57678 1058 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 YWHAZP63104 245 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 BASP1P80723 227 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 ITIH4Q14624 930 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 EFHC2Q5JST6 749 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 SH3PXD2AQ5TCZ1 1133 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 FAM43BQ6ZT52 329 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 PIGZQ86VD9 579 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 TAX1BP1Q86VP1 789 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 PALM2Q8IXS6 379 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 REM2Q8IYK8 340 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 SIX6OS1Q8N1H7 587 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 OTUD6BQ8N6M0 293 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 MDM1Q8TC05 714 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 MAML1Q92585 1016 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 ALKBH8Q96BT7 664 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 CABS1Q96KC9 395 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 NRDE2Q9H7Z3 1164 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 SAE1Q9UBE0 346 aaPredicted RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 XPO7Q9UIA9 1087 aaKnown RBP14.12□□□□□ -0.15
SMG6-203ENST00000536871 CDH9Q9ULB4 789 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 AP4E1Q9UPM8 1137 aa14.12□□□□□ -0.15
SMG6-203ENST00000536871 RASA4BC9J798 803 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 PIK3R2O00459 728 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 PRPF4O43172 522 aaKnown RBP eCLIP14.11□□□□□ -0.15
SMG6-203ENST00000536871 RASA4O43374 803 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 DRD4P21917 467 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 CYP2F1P24903 491 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 L1CAMP32004 1257 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 PSMC4P43686 418 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 MRPS5P82675 430 aaKnown RBP14.11□□□□□ -0.15
SMG6-203ENST00000536871 MMRN1Q13201 1228 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 PRUNE1Q86TP1 453 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 FUKQ8N0W3 1084 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 PQLC3Q8N755 202 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 ARRDC4Q8NCT1 418 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 MCUQ8NE86 351 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 TRPV1Q8NER1 839 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 PCDH19Q8TAB3 1148 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 APBB2Q92870 758 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 NT5C3BQ969T7 300 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 GRAMD1AQ96CP6 724 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 SEC16BQ96JE7 1060 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 SENP8Q96LD8 212 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 UROC1Q96N76 676 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 ACSS3Q9H6R3 686 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 CNGB3Q9NQW8 809 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 RAD54BQ9Y620 910 aa14.11□□□□□ -0.15
SMG6-203ENST00000536871 FAM47DPA6NHR8 397 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 H3BRJ5 948 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 GCATO75600 419 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 GABBR2O75899 941 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 GBP2P32456 591 aaPredicted RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 SARNPP82979 210 aaKnown RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 CDK16Q00536 496 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 MGAT3Q09327 533 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 KCNJ11Q14654 390 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 SLC45A4Q5BKX6 768 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 UBAP2Q5T6F2 1119 aaKnown RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 GDF6Q6KF10 455 aaPredicted RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 CXCL17Q6UXB2 119 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 PDZD4Q76G19 769 aaPredicted RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 ZC3H18Q86VM9 953 aaKnown RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 METTL23Q86XA0 190 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 CCDC197Q8NCU1 140 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 PWWP2AQ96N64 755 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 SMC6Q96SB8 1091 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 B3GNT5Q9BYG0 378 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 ACTR5Q9H9F9 607 aaPredicted RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 USP29Q9HBJ7 922 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 KCNK9Q9NPC2 374 aa14.1□□□□□ -0.15
SMG6-203ENST00000536871 DDX43Q9NXZ2 648 aaKnown RBP14.1□□□□□ -0.15
SMG6-203ENST00000536871 DDX20Q9UHI6 824 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms