RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 PTP4A2Q12974 167 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 RAB33AQ14088 237 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 PABPC1LQ4VXU2 614 aaKnown RBP11.33□□□□□ -0.6
UBE3B-205ENST00000535900 PLEKHA7Q6IQ23 1121 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 CLEC20AQ6ZU45 233 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 PAQR9Q6ZVX9 377 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 ARCQ7LC44 396 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 LRRTM3Q86VH5 581 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 PASD1Q8IV76 773 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 C3orf20Q8ND61 904 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 ZNF461Q8TAF7 563 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 ING5Q8WYH8 240 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 FGF13Q92913 245 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 ZNF653Q96CK0 615 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 C8orf48Q96LL4 319 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 TRIM62Q9BVG3 475 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 SLC2A4RGQ9NR83 387 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 KRT82Q9NSB4 513 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 EHD2Q9NZN4 543 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 AFF4Q9UHB7 1163 aaKnown RBP11.33□□□□□ -0.6
UBE3B-205ENST00000535900 USP34Q70CQ2 3546 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 PTPRDP23468 1912 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 MIA3Q5JRA6 1907 aa11.33□□□□□ -0.6
UBE3B-205ENST00000535900 MYO15AQ9UKN7 3530 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 HCRTO43612 131 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 ABLIM3O94929 683 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 LRG1P02750 347 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 DCNP07585 359 aaKnown RBP11.32□□□□□ -0.6
UBE3B-205ENST00000535900 GLI1P08151 1106 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 DESP17661 470 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 ELF1P32519 619 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 ARPP19P56211 112 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 GNG11P61952 73 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 ROR1Q01973 937 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 PTPN20Q4JDL3 420 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 PMF1Q6P1K2 205 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 PARM1Q6UWI2 310 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 MMS22LQ6ZRQ5 1243 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 SYCE1Q8N0S2 351 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 TRIM58Q8NG06 486 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 ITFG1Q8TB96 612 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 UBA3Q8TBC4 463 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 FGF14Q92915 247 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 MCRS1Q96EZ8 462 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 SPATA17Q96L03 361 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 ALS2CR12Q96Q35 445 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 CPXM1Q96SM3 734 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 KXD1Q9BQD3 176 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 C11orf70Q9BRQ4 267 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 LACRTQ9GZZ8 138 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 THAP2Q9H0W7 228 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 LRRC4Q9HBW1 653 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 CNGB3Q9NQW8 809 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 ASNSD1Q9NWL6 643 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 CNOT8Q9UFF9 292 aaKnown RBP11.32□□□□□ -0.6
UBE3B-205ENST00000535900 CACNA1HO95180 2353 aa11.32□□□□□ -0.6
UBE3B-205ENST00000535900 MTMR11A4FU01 709 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 SIGLEC16A6NMB1 481 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 CLDN5O00501 218 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 PRRG1O14668 218 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 ATF2P15336 505 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 ABCB4P21439 1286 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 BDNFP23560 247 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 PLD1Q13393 1074 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 RAB41Q5JT25 222 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 DNAJC24Q6P3W2 148 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
UBE3B-205ENST00000535900 PIGZQ86VD9 579 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 NPAS3Q8IXF0 933 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 PJA1Q8NG27 643 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 SLC35G2Q8TBE7 412 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 FNIP1Q8TF40 1166 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 IRGQQ8WZA9 623 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 SHDQ96IW2 340 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 TMEM209Q96SK2 561 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 SMOQ99835 787 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 NCAPGQ9BPX3 1015 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 PACSIN1Q9BY11 444 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 FOXQ1Q9C009 403 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 FBXO44Q9H4M3 255 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 LZTFL1Q9NQ48 299 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 TMLHEQ9NVH6 421 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 ABI2Q9NYB9 513 aaPredicted RBP11.31□□□□□ -0.6
UBE3B-205ENST00000535900 CTTNBP2NLQ9P2B4 639 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 CYTH4Q9UIA0 394 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 GUCA1BQ9UMX6 200 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
UBE3B-205ENST00000535900 SIT1Q9Y3P8 196 aa11.31□□□□□ -0.6
UBE3B-205ENST00000535900 COL4A3Q01955 1670 aa11.3□□□□□ -0.6
UBE3B-205ENST00000535900 TCRBV5S1A1TA0A578 114 aa11.3□□□□□ -0.6
UBE3B-205ENST00000535900 WDR27A2RRH5 827 aa11.3□□□□□ -0.6
UBE3B-205ENST00000535900 RCCD1A6NED2 376 aa11.3□□□□□ -0.6
UBE3B-205ENST00000535900 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-205ENST00000535900 RHOP08100 348 aa11.3□□□□□ -0.6
UBE3B-205ENST00000535900 HAPLN1P10915 354 aaPredicted RBP11.3□□□□□ -0.6
UBE3B-205ENST00000535900 RRM1P23921 792 aa11.3□□□□□ -0.6
UBE3B-205ENST00000535900 GRIK1P39086 918 aa11.3□□□□□ -0.6
UBE3B-205ENST00000535900 NOP2P46087 812 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms