RNA–Protein interactions for RNA: ENST00000534796.5

PTP4A2-216, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-216ENST00000534796 ASPAP45381 313 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 SLC6A11P48066 632 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 DLG4P78352 724 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 CCDC6Q16204 474 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 RNF43Q68DV7 783 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 TADA2BQ86TJ2 420 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 TTC39CQ8N584 583 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 CCDC33Q8N5R6 958 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 ALLCQ8N6M5 410 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 IL17RCQ8NAC3 791 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 TXNDC5Q8NBS9 432 aaKnown RBP11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 MDGA1Q8NFP4 955 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 ZFRQ96KR1 1074 aaKnown RBP11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 TPSD1Q9BZJ3 242 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 SDCBP2Q9H190 292 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 CCSER2Q9H7U1 834 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 SPHK2Q9NRA0 654 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 GMIPQ9P107 970 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 DEC1Q9P2X7 70 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 LSM7Q9UK45 103 aaKnown RBP11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 PCDHA5Q9Y5H7 936 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 GREB1Q4ZG55 1949 aa11.28□□□□□ -0.6
PTP4A2-216ENST00000534796 PTPRDP23468 1912 aa11.27□□□□□ -0.6
PTP4A2-216ENST00000534796 ANAPC1Q9H1A4 1944 aa11.27□□□□□ -0.6
PTP4A2-216ENST00000534796 FAM237AA0A1B0GTK4 181 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 SCAMP3O14828 347 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 TM4SF5O14894 197 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 KHNYNO15037 678 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 HLA-DRAP01903 254 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 CCDC130P13994 396 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 NR2F2P24468 414 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 PSMC2P35998 433 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 ATP5C1P36542 298 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 KIR2DL1P43626 348 aaPredicted RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 MAP3K7CLP57077 242 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 INCA1Q0VD86 236 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 SPDYCQ5MJ68 293 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 KLHDC10Q6PID8 442 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 HTR3DQ70Z44 454 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 LPCAT2Q7L5N7 544 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 CYP2U1Q7Z449 544 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 LAPTM4BQ86VI4 370 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 TTC30AQ86WT1 665 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 ETFBKMTQ8IXQ9 262 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 ZMIZ2Q8NF64 920 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 OLIG1Q8TAK6 271 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 FAXDC2Q96IV6 333 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 XPO6Q96QU8 1125 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 HNRNPABQ99729 332 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 SMOQ99835 787 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 EDEM2Q9BV94 578 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 LSM14BQ9BX40 385 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 NT5C1AQ9BXI3 368 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 SCAND2PQ9GZW5 306 aaPredicted RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 CYLDQ9NQC7 956 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.612e-17■■■■■ 65.2
PTP4A2-216ENST00000534796 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 BCCIPQ9P287 314 aaKnown RBP eCLIP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 SCML2Q9UQR0 700 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 HELZP42694 1942 aaKnown RBP11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
PTP4A2-216ENST00000534796 A0A1W2PQ27 194 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 A0A1W2PQ64 194 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 A0A1W2PQD8 194 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 SGK1O00141 431 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 STX10O60499 249 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 TULP3O75386 442 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 ADORA2BP29275 332 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 GTF2H1P32780 548 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 P2RY2P41231 377 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 KDSRQ06136 332 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 ANO4Q32M45 955 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 C12orf40Q86WS4 652 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 BBS7Q8IWZ6 715 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 FAM186BQ8IYM0 893 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 GUF1Q8N442 669 aaKnown RBP11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 TERB1Q8NA31 727 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 WNT2BQ93097 391 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 CYFIP2Q96F07 1278 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 CDK5RAP1Q96SZ6 601 aaKnown RBP11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 NIF3L1Q9GZT8 377 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 SMOC1Q9H4F8 434 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 FAM124BQ9H5Z6 455 aaPredicted RBP11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 RXFP3Q9NSD7 469 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 WDR35Q9P2L0 1181 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 HMGXB4Q9UGU5 601 aa11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 CNOT1A5YKK6 2376 aaKnown RBP11.26□□□□□ -0.61
PTP4A2-216ENST00000534796 RALGAPA1Q6GYQ0 2036 aa11.25□□□□□ -0.61
PTP4A2-216ENST00000534796 TCRBV21S2A2A0A5A6 115 aa11.25□□□□□ -0.61
PTP4A2-216ENST00000534796 CILPO75339 1184 aa11.25□□□□□ -0.61
PTP4A2-216ENST00000534796 BEST1O76090 585 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms