RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 GDAP2Q9NXN4 497 aa10.11□□□□□ -0.79
CHKA-207ENST00000533728 BCCIPQ9P287 314 aaKnown RBP eCLIP10.11□□□□□ -0.79
CHKA-207ENST00000533728 RSPH14Q9UHP6 348 aa10.11□□□□□ -0.79
CHKA-207ENST00000533728 CYTH4Q9UIA0 394 aa10.11□□□□□ -0.79
CHKA-207ENST00000533728 DNPEPQ9ULA0 475 aa10.11□□□□□ -0.79
CHKA-207ENST00000533728 TPX2Q9ULW0 747 aaKnown RBP10.11□□□□□ -0.79
CHKA-207ENST00000533728 TSC2P49815 1807 aa10.11□□□□□ -0.79
CHKA-207ENST00000533728 DSPP15924 2871 aaKnown RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 FAM170AA1A519 330 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 CFAP69A5D8W1 941 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 C2CD4BA6NLJ0 364 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 CYSRT1A8MQ03 144 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 APOC4-APOC2K7ER74 178 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 PIRO00625 290 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 CDH16O75309 829 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 DUSP11O75319 330 aaKnown RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 GJB6O95452 261 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 NPTXRO95502 500 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 APOC2P02655 101 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 CSF2RAP15509 400 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 FGFR4P22455 802 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 CST5P28325 142 aaPredicted RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 STIP1P31948 543 aaKnown RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 HPDP32754 393 aaPredicted RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 CCT5P48643 541 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 PSEN2P49810 448 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 ARSEP51690 589 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 NDST1P52848 882 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 NUBP1P53384 320 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 SLC18A1P54219 525 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 DMWDQ09019 674 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 MFSD10Q14728 455 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 BOLA3Q53S33 107 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 FAM47CQ5HY64 1035 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 C4orf22Q6V702 233 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 DPH6Q7L8W6 267 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 GSTA5Q7RTV2 222 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 TMEM110Q86TL2 294 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 SESTD1Q86VW0 696 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 CNPY4Q8N129 248 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 CRYBG2Q8N1P7 616 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 JOSD2Q8TAC2 188 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 ZNF473Q8WTR7 871 aaKnown RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 KAT2BQ92831 832 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 ZNF668Q96K58 619 aaPredicted RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 XPO6Q96QU8 1125 aaKnown RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 FRMD8Q9BZ67 464 aaPredicted RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 ADAM7Q9H2U9 754 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 UBN1Q9NPG3 1134 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 METTL5Q9NRN9 209 aaKnown RBP10.1□□□□□ -0.79
CHKA-207ENST00000533728 NINJ2Q9NZG7 142 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 ZNF148Q9UQR1 794 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 FAM50BQ9Y247 325 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 IGF2RP11717 2491 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 PATJQ8NI35 1801 aa10.1□□□□□ -0.79
CHKA-207ENST00000533728 A0A087WUV0 522 aaPredicted RBP10.09□□□□□ -0.79
CHKA-207ENST00000533728 GOLGA8SH3BPF8 625 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ALOX15BO15296 676 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 GALR2O43603 387 aaPredicted RBP10.09□□□□□ -0.79
CHKA-207ENST00000533728 ADAMTS4O75173 837 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ZNF189O75820 626 aaPredicted RBP10.09□□□□□ -0.79
CHKA-207ENST00000533728 CYP2C9P11712 490 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 KRT10P13645 584 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 TCF4P15884 667 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 MIPP30301 263 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 CHKAP35790 457 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 GJC1P36383 396 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 MAGEA4P43358 317 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 PTPN9P43378 593 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ACADSBP45954 432 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 CRYBB1P53674 252 aaPredicted RBP10.09□□□□□ -0.79
CHKA-207ENST00000533728 GJA9P57773 515 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 FAAP100Q0VG06 881 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 P3H1Q32P28 736 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ATP13A4Q4VNC1 1196 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ZFYVE27Q5T4F4 411 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 RNASEH2BQ5TBB1 312 aaKnown RBP10.09□□□□□ -0.79
CHKA-207ENST00000533728 C9orf57Q5W0N0 161 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 FOXR1Q6PIV2 292 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 TLK2Q86UE8 772 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 RNF135Q8IUD6 432 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 MAP7D3Q8IWC1 876 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ARFGAP1Q8N6T3 406 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 KLHDC9Q8NEP7 349 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 SLC35F5Q8WV83 523 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ZBTB10Q96DT7 871 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 SETD4Q9NVD3 440 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 EURLQ9NYK6 297 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 SENP1Q9P0U3 644 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 HESX1Q9UBX0 185 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 TSPAN16Q9UKR8 245 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 USP18Q9UMW8 372 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 FARP1Q9Y4F1 1045 aaPredicted RBP10.09□□□□□ -0.79
CHKA-207ENST00000533728 SMG1Q96Q15 3661 aaKnown RBP10.09□□□□□ -0.79
CHKA-207ENST00000533728 PTPRDP23468 1912 aa10.09□□□□□ -0.79
CHKA-207ENST00000533728 ZNF638Q14966 1978 aaKnown RBP10.08□□□□□ -0.8
CHKA-207ENST00000533728 E7ESA3 106 aa10.08□□□□□ -0.8
CHKA-207ENST00000533728 E7EVH7 732 aa10.08□□□□□ -0.8
CHKA-207ENST00000533728 MYO1CO00159 1063 aa10.08□□□□□ -0.8
CHKA-207ENST00000533728 MCF2LO15068 1137 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms