RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 ATG4AQ8WYN0 398 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 VPS33AQ96AX1 596 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 OTULINQ96BN8 352 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 THUMPD3Q9BV44 507 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PACSIN1Q9BY11 444 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 EXOSC4Q9NPD3 245 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DMGDHQ9UI17 866 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TFR2Q9UP52 801 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 RUVBL2Q9Y230 463 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 RWDD3Q9Y3V2 267 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DUSP10Q9Y6W6 482 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 A0A0G2JLW4 131 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 F5H5T6 163 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 RIPK2O43353 540 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 GUCY1B2O75343 617 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 HOXB8P17481 243 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 SOX6P35712 828 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CASP4P49662 377 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 AQP5P55064 265 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PURAQ00577 322 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 POLD3Q15054 466 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ANGEL2Q5VTE6 544 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 LRRC8DQ7L1W4 858 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 OMA1Q96E52 524 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TMEM176AQ96HP8 235 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CBWD1Q9BRT8 395 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 APOL5Q9BWW9 433 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 EMILIN2Q9BXX0 1053 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PRKD2Q9BZL6 878 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DCLK3Q9C098 648 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 MTMR12Q9C0I1 747 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 MROH8Q9H579 483 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 HACL1Q9UJ83 578 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ITGA11Q9UKX5 1188 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 AP4E1Q9UPM8 1137 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CLCA2Q9UQC9 943 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DNAJC16Q9Y2G8 782 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CAB39Q9Y376 341 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 STARD13Q9Y3M8 1113 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DNALI1O14645 258 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 HOXA2O43364 376 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PMPCBO75439 489 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PRIM2P49643 509 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PMS1P54277 932 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PTPN11Q06124 597 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 BST2Q10589 180 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TBL3Q12788 808 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PRKAA1Q13131 559 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 EIF2B5Q13144 721 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 MPP3Q13368 585 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PKN2Q16513 984 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 NT5DC4Q86YG4 428 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 MYO1HQ8N1T3 1032 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ZNF786Q8N393 782 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 EFHD2Q96C19 240 aaPredicted RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ZFYVE19Q96K21 471 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PRRG3Q9BZD7 231 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 UBXN6Q9BZV1 441 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DEFB129Q9H1M3 183 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 KCTD10Q9H3F6 313 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 RAD21L1Q9H4I0 556 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 SYBUQ9NX95 663 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 RABL2BQ9UNT1 228 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 LZTS1Q9Y250 596 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 F8W810 466 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CAPN1P07384 714 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CTSHP09668 335 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TPBGLP0DKB5 382 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 IMPDH2P12268 514 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TKTP29401 623 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 KRT20P35900 424 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 NR2C2P49116 596 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ERFP50548 548 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 RAD23AP54725 363 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 NCALDP61601 193 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 PKN1Q16512 942 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 MEA1Q16626 185 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TRIM16LQ309B1 348 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 TMEM119Q4V9L6 283 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ARHGAP15Q53QZ3 475 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 GRTP1Q5TC63 336 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 LAYNQ6UX15 382 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 MCOLN2Q8IZK6 566 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DNERQ8NFT8 737 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CDK5RAP1Q96SZ6 601 aaKnown RBP7.22□□□□□ -1.25
CTNND1-236ENST00000533667 NUDT12Q9BQG2 462 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 SLC7A5P2Q9GIP4 190 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 IL1RL2Q9HB29 575 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 CISHQ9NSE2 258 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 SYNPO2Q9UMS6 1093 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 ANKRD6Q9Y2G4 727 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.22□□□□□ -1.253e-9■□□□□ 10.4
CTNND1-236ENST00000533667 PCDHA3Q9Y5H8 950 aa7.22□□□□□ -1.25
CTNND1-236ENST00000533667 HMGB3O15347 200 aaKnown RBP7.21□□□□□ -1.25
CTNND1-236ENST00000533667 KRT6AP02538 564 aa7.21□□□□□ -1.25
CTNND1-236ENST00000533667 KRT6BP04259 564 aa7.21□□□□□ -1.25
CTNND1-236ENST00000533667 SERPINE1P05121 402 aa7.21□□□□□ -1.25
CTNND1-236ENST00000533667 GLI1P08151 1106 aa7.21□□□□□ -1.25
CTNND1-236ENST00000533667 STAG3L1P0CL83 205 aa7.21□□□□□ -1.25
CTNND1-236ENST00000533667 MLNP12872 115 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms