RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 A8MXQ7 604 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 GFRA2O00451 464 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 CLDN5O00501 218 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 KIAA0391O15091 583 aaKnown RBP11.32□□□□□ -0.6
CTNND1-235ENST00000533189 TACC1O75410 805 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 ZNF883P0CG24 379 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 NCAM1P13591 858 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 IDEP14735 1019 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 TUBP50607 506 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 CACNA2D1P54289 1103 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 TNNC1P63316 161 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 CYP4F3Q08477 520 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 C19orf57Q0VDD7 668 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 STARD3Q14849 445 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 IL27RAQ6UWB1 636 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 SV2BQ7L1I2 683 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 GALNT15Q8N3T1 639 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 RHBDD1Q8TEB9 315 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 DNASE2BQ8WZ79 361 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 TOE1Q96GM8 510 aaKnown RBP11.32□□□□□ -0.6
CTNND1-235ENST00000533189 KIF2CQ99661 725 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 GPR174Q9BXC1 333 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 BBS2Q9BXC9 721 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 CCSER2Q9H7U1 834 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 PRDM16Q9HAZ2 1276 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 CD248Q9HCU0 757 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 OLFML3Q9NRN5 406 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 TM7SF3Q9NS93 570 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 TMEM30AQ9NV96 361 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 WDR35Q9P2L0 1181 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 CCDC39Q9UFE4 941 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 NFE2L3Q9Y4A8 694 aa11.32□□□□□ -0.6
CTNND1-235ENST00000533189 KNTC1P50748 2209 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 TRABD2BA6NFA1 517 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 PRRT4C9JH25 899 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 FLRT2O43155 660 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 CACNG3O60359 315 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 CILPO75339 1184 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 FAM163BP0C2L3 166 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 TYRP14679 529 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 DGKGP49619 791 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 CASP5P51878 434 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 GOLGA8FQ08AF8 430 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 GOLGA8DPQ0D2H9 430 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 SUZ12Q15022 739 aaKnown RBP11.31□□□□□ -0.6
CTNND1-235ENST00000533189 SNX30Q5VWJ9 437 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 RRAGBQ5VZM2 374 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 TPGS1Q6ZTW0 290 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 HTR3DQ70Z44 454 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 TRAPPC11Q7Z392 1133 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
CTNND1-235ENST00000533189 WDR49Q8IV35 697 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 SCUBE3Q8IX30 993 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 CADM4Q8NFZ8 388 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 ADAM32Q8TC27 787 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 WBP2Q969T9 261 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 DNAJC19Q96DA6 116 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 EPSTI1Q96J88 318 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 UBL7Q96S82 380 aaPredicted RBP11.31□□□□□ -0.6
CTNND1-235ENST00000533189 MED10Q9BTT4 135 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 B3GNT5Q9BYG0 378 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 DPEP3Q9H4B8 488 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 IL21RQ9HBE5 538 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.31□□□□□ -0.62e-6■■■■■ 29.3
CTNND1-235ENST00000533189 WSB2Q9NYS7 404 aaPredicted RBP11.31□□□□□ -0.6
CTNND1-235ENST00000533189 GMIPQ9P107 970 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 LSM7Q9UK45 103 aaKnown RBP11.31□□□□□ -0.6
CTNND1-235ENST00000533189 NME7Q9Y5B8 376 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 MAST4O15021 2626 aa11.31□□□□□ -0.6
CTNND1-235ENST00000533189 A0A087WV48 116 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 BCAT2O15382 392 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-235ENST00000533189 ATXN1LP0C7T5 689 aaKnown RBP11.3□□□□□ -0.6
CTNND1-235ENST00000533189 TNNI1P19237 187 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 GJB2P29033 226 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 OXTRP30559 389 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 TXLNAP40222 546 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 ABCG1P45844 678 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 SLC5A3P53794 718 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 SF3A1Q15459 793 aaKnown RBP11.3□□□□□ -0.6
CTNND1-235ENST00000533189 HLA-BQ31612 363 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 WDR72Q3MJ13 1102 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 DCAF12L1Q5VU92 463 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 CBWD2Q8IUF1 395 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 PDCD7Q8N8D1 485 aaKnown RBP11.3□□□□□ -0.6
CTNND1-235ENST00000533189 ENGASEQ8NFI3 743 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 SCAMP5Q8TAC9 235 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 BAHD1Q8TBE0 780 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-235ENST00000533189 KCNK16Q96T55 309 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 DMAP1Q9NPF5 467 aaPredicted RBP11.3□□□□□ -0.6
CTNND1-235ENST00000533189 COMMD8Q9NX08 183 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 TOR4AQ9NXH8 423 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 MARK1Q9P0L2 795 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 FNDC3AQ9Y2H6 1198 aaKnown RBP11.3□□□□□ -0.6
CTNND1-235ENST00000533189 PCDHGB2Q9Y5G2 931 aa11.3□□□□□ -0.6
CTNND1-235ENST00000533189 TMEM131Q92545 1883 aa11.29□□□□□ -0.6
CTNND1-235ENST00000533189 CFAP46Q8IYW2 2715 aa11.29□□□□□ -0.6
CTNND1-235ENST00000533189 WASH3PC4AMC7 463 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms