RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CPA6Q8N4T0 437 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 EXOC4Q96A65 974 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 FAM126AQ9BYI3 521 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 EBF3Q9H4W6 596 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 ECT2Q9H8V3 914 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 PRMT8Q9NR22 394 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 FAM86C1Q9NVL1 165 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 DUS2Q9NX74 493 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 KIAA1257Q9ULG3 409 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 SCML2Q9UQR0 700 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 USP3Q9Y6I4 520 aa13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 KIF26AQ9ULI4 1882 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-212ENST00000533058 CACNA1IQ9P0X4 2223 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 F8VZ95 297 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 SLC9A3R1O14745 358 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 MED7O43513 233 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 GFPT2O94808 682 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 PAPSS2O95340 614 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 ABL1P00519 1130 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 GNA15P30679 374 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 STAT1P42224 750 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 IFNAR2P48551 515 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 KIF11P52732 1056 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 SLC8A3P57103 927 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 BPIFB4P59827 614 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 IFRD2Q12894 506 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 MTAPQ13126 283 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 NR1H3Q13133 447 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 TMEM196Q5HYL7 178 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 TRIM68Q6AZZ1 485 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 SMYD5Q6GMV2 418 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 KLHDC10Q6PID8 442 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZC3H14Q6PJT7 736 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 SPEM1Q8N4L4 309 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 OTUB2Q96DC9 234 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 CHFRQ96EP1 664 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 NUP58Q9BVL2 599 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 NAA15Q9BXJ9 866 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 PDCL3Q9H2J4 239 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 CYLDQ9NQC7 956 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 TLR8Q9NR97 1041 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 TBC1D14Q9P2M4 693 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 CPQQ9Y646 472 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 ANAPC1Q9H1A4 1944 aa13.62□□□□□ -0.23
TRAPPC4-212ENST00000533058 MIA3Q5JRA6 1907 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 TICRRQ7Z2Z1 1910 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 E2F8A0AVK6 867 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 COCHO43405 550 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 NFATC1O95644 943 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 TPM1P09493 284 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 MBL2P11226 248 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 ARSAP15289 507 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 GJA4P35212 333 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 SOX5P35711 763 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 PSEN1P49768 467 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 CCR3P51677 355 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZNF132P52740 706 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 ARID5AQ03989 594 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 PPP2R5DQ14738 602 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 PON2Q15165 354 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 STILQ15468 1287 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 SARM1Q6SZW1 724 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 CCDC186Q7Z3E2 898 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 FAM71AQ8IYT1 594 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 ADGRG2Q8IZP9 1017 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZNF397Q8NF99 534 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 TTC8Q8TAM2 541 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 CPLX3Q8WVH0 158 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 TFAP2BQ92481 460 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 NKD2Q969F2 451 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZFRQ96KR1 1074 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 LINC00597Q9H2U6 94 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 GMIPQ9P107 970 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 TSPAN16Q9UKR8 245 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 CNTN6Q9UQ52 1028 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 WNT6Q9Y6F9 365 aa13.61□□□□□ -0.23
TRAPPC4-212ENST00000533058 M0QYV0 167 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 CCDC172P0C7W6 258 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 DRD1P21728 446 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 KRT9P35527 623 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 BCAT1P54687 386 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 GRSF1Q12849 480 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 GAS6Q14393 721 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 CNGA2Q16280 664 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 FBXO43Q4G163 708 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 RAB41Q5JT25 222 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 SPECC1LQ69YQ0 1117 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 GPRIN1Q7Z2K8 1008 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 SLC47A2Q86VL8 602 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZBTB44Q8NCP5 570 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 UBA3Q8TBC4 463 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 IQCDQ96DY2 449 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 P2RY13Q9BPV8 354 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 CCSER2Q9H7U1 834 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 ACP6Q9NPH0 428 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 ZSCAN32Q9NX65 697 aa13.6□□□□□ -0.23
TRAPPC4-212ENST00000533058 CLIC5Q9NZA1 410 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms