RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TIMM44O43615 452 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ADCY3O60266 1144 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 UBA1P22314 1058 aaKnown RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 RRM1P23921 792 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 MCL1Q07820 350 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 NIPA1Q7RTP0 329 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 SMPD4Q9NXE4 827 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 F8VZ95 297 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 XYLBO75191 536 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 TRIM16O95361 564 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 PTPN11Q06124 597 aaPredicted RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ADIGQ0VDE8 80 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 ZNF571Q7Z3V5 609 aaPredicted RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 TSEN34Q9BSV6 310 aaKnown RBP15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 FAM167BQ9BTA0 163 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 USP18Q9UMW8 372 aa15.26■□□□□ 0.03
PCDHA9-202ENST00000532602 NCF1BA6NI72 391 aaPredicted RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 NCF1CA8MVU1 366 aaPredicted RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 NCF1P14598 390 aaPredicted RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 MYO1HQ8N1T3 1032 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 SYT15Q9BQS2 421 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CABYRO75952 493 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 MDH1P40925 334 aaKnown RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CELF3Q5SZQ8 465 aaKnown RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CACHD1Q5VU97 1274 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 SLC27A1Q6PCB7 646 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 GPR142Q7Z601 462 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 RIOX2Q8IUF8 465 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 EIF3LQ9Y262 564 aaKnown RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 GAKO14976 1311 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 MSCO60682 206 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 MAPK1P28482 360 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 MAGEA9P43362 315 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CNTN1Q12860 1018 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 TFAP2DQ7Z6R9 452 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 IFNEQ86WN2 208 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CELF6Q96J87 481 aaKnown RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 FAR2Q96K12 515 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 ASB7Q9H672 318 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 UTP6Q9NYH9 597 aaKnown RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CYP39A1Q9NYL5 469 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 TRPV2Q9Y5S1 764 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 RENBPP51606 427 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 DAB2P98082 770 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 DENND1BQ6P3S1 775 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 LRRC6Q86X45 466 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 RXFP2Q8WXD0 754 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 FAM162AQ96A26 154 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 E2F7Q96AV8 911 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 SGF29Q96ES7 293 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 ADAM2Q99965 735 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 LRRC40Q9H9A6 602 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 MAN1C1Q9NR34 630 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 PDGFCQ9NRA1 345 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 TSPAN16Q9UKR8 245 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 ADGRB2O60241 1585 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CBX4O00257 560 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 PEX10O60683 326 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 CCL23P55773 120 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 ILF2Q12905 390 aaKnown RBP15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 SLC39A12Q504Y0 691 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 NT5DC4Q86YG4 428 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 HPS4Q9NQG7 708 aa15.25■□□□□ 0.03
PCDHA9-202ENST00000532602 MYOM1P52179 1685 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 PJA2O43164 708 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 BLVRAP53004 296 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 TERF2Q15554 542 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 DEFB115Q30KQ5 88 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 TFDP3Q5H9I0 405 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 KHDRBS2Q5VWX1 349 aaKnown RBP15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 CCNI2Q6ZMN8 369 aaPredicted RBP15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 PHACTR4Q8IZ21 702 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 TINF2Q9BSI4 451 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 AP4E1Q9UPM8 1137 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 SDR42E2A6NKP2 422 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 GJB1P08034 283 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 KBTBD12Q3ZCT8 623 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 ILDR1Q86SU0 546 aaPredicted RBP15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 CLEC4FQ8N1N0 589 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 FAM163AQ96GL9 167 aaPredicted RBP15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 OLFM3Q96PB7 478 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 ISCUQ9H1K1 167 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 CACNA2D2Q9NY47 1150 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 TGM3Q08188 693 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 DMTNQ08495 405 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 TMEM119Q4V9L6 283 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 CACUL1Q86Y37 369 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 KRT78Q8N1N4 520 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 B4GALNT2Q8NHY0 566 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 F8W810 466 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 AKAP10O43572 662 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 MLH1P40692 756 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 BTKQ06187 659 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 SKA1Q96BD8 255 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 SYTL2Q9HCH5 934 aa15.24■□□□□ 0.03
PCDHA9-202ENST00000532602 UXTQ9UBK9 157 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms