RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 ULBP1Q9BZM6 244 aa12.05□□□□□ -0.48
CSRP1-215ENST00000532313 BLOC1S4Q9NUP1 217 aa12.05□□□□□ -0.48
CSRP1-215ENST00000532313 PKD2L2Q9NZM6 624 aa12.05□□□□□ -0.48
CSRP1-215ENST00000532313 ARHGAP10A1A4S6 786 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 HEATR9A2RTY3 570 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 CCL16O15467 120 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 TUBP50607 506 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 MNAT1P51948 309 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 USP4Q13107 963 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 USP45Q70EL2 814 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ADCK2Q7Z695 626 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ZNF606Q8WXB4 792 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 SNF8Q96H20 258 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 SAYSD1Q9NPB0 183 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 LRRIQ3A6PVS8 624 aaPredicted RBP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 CASP4P49662 377 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 TGM3Q08188 693 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ATG16L1Q676U5 607 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 PPCSQ9HAB8 311 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ARHGEF38Q9NXL2 777 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ZFATQ9P243 1243 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 LAMB4A4D0S4 1761 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ATP9BO43861 1147 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 AIF1P55008 147 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ZRANB3Q5FWF4 1079 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 PPP1R15BQ5SWA1 713 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 WFIKKN2Q8TEU8 576 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 NLNQ9BYT8 704 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 PDZD7Q9H5P4 517 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 COL20A1Q9P218 1284 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 A0A0B4J269 797 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 KIF3CO14782 793 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 RASGRF2O14827 1237 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 GTF2F1P35269 517 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 GRK3P35626 688 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 FXR1P51114 621 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 UGCGQ16739 394 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 TTI2Q6NXR4 508 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 IPMKQ8NFU5 416 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 RXFP2Q8WXD0 754 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 WNT8BQ93098 351 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 VAT1Q99536 393 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 YIPF2Q9BWQ6 316 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 OSBPL8Q9BZF1 889 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 FAM129AQ9BZQ8 928 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 SLC39A10Q9ULF5 831 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 TPX2Q9ULW0 747 aaKnown RBP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ANKRD63C9JTQ0 380 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 FOXN3O00409 490 aaPredicted RBP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 TLR5O60602 858 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 PPP1R11O60927 126 aaPredicted RBP12.04□□□□□ -0.48
CSRP1-215ENST00000532313 RASSF2P50749 326 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 BRMS1LQ5PSV4 323 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 CEP85LQ5SZL2 805 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 ERMARDQ5T6L9 678 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 PHACTR4Q8IZ21 702 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 IRGQQ8WZA9 623 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 AASDHPPTQ9NRN7 309 aa12.04□□□□□ -0.48
CSRP1-215ENST00000532313 TSPAN3O60637 253 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 MBTD1Q05BQ5 628 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 EEF1DP3Q658K8 133 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 HS6ST3Q8IZP7 471 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 NAT9Q9BTE0 207 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.03□□□□□ -0.48
CSRP1-215ENST00000532313 GOLGA8KD6RF30 607 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 GRM6O15303 877 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 ERVK-21P61565 698 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 DUSP4Q13115 394 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 LLGL1Q15334 1064 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
CSRP1-215ENST00000532313 FAM35AQ86V20 835 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 PTPRN2Q92932 1015 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 CHAMP1Q96JM3 812 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 GDAP1L1Q96MZ0 367 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 GIMAP4Q9NUV9 329 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 NMRK1Q9NWW6 199 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.03□□□□□ -0.48
CSRP1-215ENST00000532313 F8VP50 259 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 BRCC3P46736 316 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 CBX1P83916 185 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 PCSK7Q16549 785 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 BMT2Q1RMZ1 405 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 TMTC4Q5T4D3 741 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 CST9Q5W186 159 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 EDEM1Q92611 657 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 TRHDEQ9UKU6 1024 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 RGPD5Q99666 1765 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 LRRC72A6NJI9 287 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 ENC1O14682 589 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 OPLAHO14841 1288 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 XPO1O14980 1071 aaKnown RBP12.03□□□□□ -0.48
CSRP1-215ENST00000532313 POLBP06746 335 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 HOXB8P17481 243 aaPredicted RBP12.03□□□□□ -0.48
CSRP1-215ENST00000532313 GRIN1Q05586 938 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 CLEC16AQ2KHT3 1053 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 TPGS1Q6ZTW0 290 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 ANKRD42Q8N9B4 389 aa12.03□□□□□ -0.48
CSRP1-215ENST00000532313 IRF7Q92985 503 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms