RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 NEDD1Q8NHV4 660 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF564Q8TBZ8 553 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 HCAR2Q8TDS4 363 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 RMND5BQ96G75 393 aaPredicted RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 SLC4A9Q96Q91 983 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ANKRD60Q9BZ19 345 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ARMC1Q9NVT9 282 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 THG1LQ9NWX6 298 aaKnown RBP8.42□□□□□ -1.06
CSDE1-214ENST00000530886 IKBKGQ9Y6K9 419 aa8.42□□□□□ -1.06
CSDE1-214ENST00000530886 ATP2A1O14983 1001 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 TEX28O15482 410 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SCO2O43819 266 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 UFL1O94874 794 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 TDP2O95551 362 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 M6PRP20645 277 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 IREB2P48200 963 aaKnown RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SELENBP1Q13228 472 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 PTK7Q13308 1070 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 LRP8Q14114 963 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ESCO1Q5FWF5 840 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 CES4AQ5XG92 561 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 KIAA1841Q6NSI8 718 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 HEATR4Q86WZ0 1026 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 COLGALT2Q8IYK4 626 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 TMEM102Q8N9M5 508 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 GOLM1Q8NBJ4 401 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 PNMA1Q8ND90 353 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 PAFAH2Q99487 392 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 TUBA1CQ9BQE3 449 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 FAM96AQ9H5X1 160 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 RMND5AQ9H871 391 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 C6orf50Q9HD87 102 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SIPA1L1O43166 1804 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 CLUHO75153 1309 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF335Q9H4Z2 1342 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 DENND3A2RUS2 1198 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 MEI4A8MW99 385 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 GOLGA8MH3BSY2 632 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 STAMBPO95630 424 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 KRT75O95678 551 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 NR3C1P04150 777 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ADRA2BP18089 450 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 CASP4P49662 377 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ERFP50548 548 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 STAT2P52630 851 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 KRT76Q01546 638 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 BOLA3Q53S33 107 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 GADL1Q6ZQY3 521 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 C14orf80Q86SX3 495 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 FAM20CQ8IXL6 584 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 GALNT4Q8N4A0 578 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SLC43A3Q8NBI5 491 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ATL1Q8WXF7 558 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ATG4AQ8WYN0 398 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 CMTM5Q96DZ9 223 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 MAELQ96JY0 434 aaKnown RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 YME1L1Q96TA2 773 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 HOXD1Q9GZZ0 328 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 DHX33Q9H6R0 707 aaKnown RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 BCAS3Q9H6U6 928 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 VPS37BQ9H9H4 285 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 MKNK2Q9HBH9 465 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 TMEM260Q9NX78 707 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 MYH9P35579 1960 aaKnown RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 IQANK1A0A1B0GTG1 560 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 E7ESA3 106 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 DYNC1LI2O43237 492 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 TGFB1I1O43294 461 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ADAMTS2O95450 1211 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ABCB1P08183 1280 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 MSL3P1P0C860 447 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 FMO5P49326 533 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SCNN1DP51172 638 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 AQP5P55064 265 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 UBAP2LQ14157 1087 aaKnown RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ABCB5Q2M3G0 1257 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 DCAF17Q5H9S7 520 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 RNASEH2BQ5TBB1 312 aaKnown RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SETD3Q86TU7 594 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 FIBCD1Q8N539 461 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SLC15A4Q8N697 577 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 HELQQ8TDG4 1101 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 CRYGNQ8WXF5 182 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 ZNF512Q96ME7 567 aaPredicted RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 RMDN3Q96TC7 470 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SMYD3Q9H7B4 428 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 C12orf10Q9HB07 376 aa8.41□□□□□ -1.06
CSDE1-214ENST00000530886 SUCOQ9UBS9 1254 aaKnown RBP8.41□□□□□ -1.06
CSDE1-214ENST00000530886 A0A1B0GTW7 788 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 hCG_1984214I3L0E3 225 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 RNF103O00237 685 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 ACOX3O15254 700 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 KRT6AP02538 564 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 KRT6BP04259 564 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 ENO2P09104 434 aaPredicted RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 AP3M2P53677 418 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 ALDH18A1P54886 795 aaKnown RBP8.4□□□□□ -1.06
CSDE1-214ENST00000530886 PEX3P56589 373 aa8.4□□□□□ -1.06
CSDE1-214ENST00000530886 RHBDL3P58872 404 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms