RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 NEDD8-MDP1E9PL57 170 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PLK4O00444 970 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 KCNK3O14649 394 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SLC9A3R1O14745 358 aaPredicted RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MAP3K7O43318 606 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CILPO75339 1184 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 OAS1P00973 400 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PLA2G2AP14555 144 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TCF3P15923 654 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PCSK1P29120 753 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 NTSR1P30989 418 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PRPHP41219 470 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PNPLA4P41247 253 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MAGEA11P43364 429 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TNFRSF4P43489 277 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ABCG1P45844 678 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF131P52739 623 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SLC7A9P82251 487 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GTF2BQ00403 316 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 IL9RQ01113 521 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 BNC1Q01954 994 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GAD2Q05329 585 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GRIN1Q05586 938 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 HNRNPDQ14103 355 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 HSF5Q4G112 596 aaPredicted RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GRAMD4Q6IC98 578 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 C4orf50Q6ZRC1 276 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TPGS1Q6ZTW0 290 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 HS2ST1Q7LGA3 356 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 DYMQ7RTS9 669 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TMPRSS7Q7RTY8 843 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 RABEPKQ7Z6M1 372 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SFR1Q86XK3 245 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 BRSK2Q8IWQ3 736 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ETFBKMTQ8IXQ9 262 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TMEM86AQ8N2M4 240 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 OR5B17Q8NGF7 314 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CXorf38Q8TB03 319 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 RHBDD1Q8TEB9 315 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SNX19Q92543 992 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TOE1Q96GM8 510 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PCED1BQ96HM7 432 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 FUBP3Q96I24 572 aaKnown RBP eCLIP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TSPAN18Q96SJ8 248 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GPR174Q9BXC1 333 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF518BQ9C0D4 1074 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 DPEP3Q9H4B8 488 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CCSER2Q9H7U1 834 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PDE11AQ9HCR9 933 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TM7SF3Q9NS93 570 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 BLOC1S4Q9NUP1 217 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 DNAJC17Q9NVM6 304 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 RBAKQ9NYW8 714 aaPredicted RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 KCND2Q9NZV8 630 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 DEC1Q9P2X7 70 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 KCNG1Q9UIX4 513 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ODF2LQ9ULJ1 636 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 NME7Q9Y5B8 376 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PCDHB3Q9Y5E6 796 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PTPRQQ9UMZ3 2332 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PIEZO2Q9H5I5 2752 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MYO18AQ92614 2054 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 A0A1B0GVT2 93 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PRRT4C9JH25 899 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 CBX4O00257 560 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 LAD1O00515 517 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GABRDO14764 452 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ZBTB24O43167 697 aaPredicted RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 COCHO43405 550 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 IL18RAPO95256 599 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 OLFM2O95897 454 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TMEM191BP0C7N4 346 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 NCAM1P13591 858 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 GNSP15586 552 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 EIF2DP41214 584 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 LHX1P48742 406 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PGFP49763 221 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 PDE6CP51160 858 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ANAPC15P60006 121 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 MYO1EQ12965 1108 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SLC14A1Q13336 389 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 HLA-BQ31612 363 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 WDR45BQ5MNZ6 344 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SYCP2LQ5T4T6 812 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 DCAF12L1Q5VU92 463 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TDRD10Q5VZ19 366 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 LARP1BQ659C4 914 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 FAM171BQ6P995 826 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 DHRS13Q6UX07 377 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 LIAT1Q6ZQX7 453 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TRMT11Q7Z4G4 463 aaKnown RBP3.75□□□□□ -1.81
PTPRC-213ENST00000529828 FAM124AQ86V42 546 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 TOP6BLQ8N6T0 577 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 LRRC52Q8N7C0 313 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 SCAMP5Q8TAC9 235 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 RAD54LQ92698 747 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 FBXO32Q969P5 355 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ELMO3Q96BJ8 720 aa3.75□□□□□ -1.81
PTPRC-213ENST00000529828 ZNF419Q96HQ0 510 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms