RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, human

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CA-206	ENST00000529724	GABRE	P78334	506 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SKOR1	P84550	965 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	ANO4	Q32M45	955 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	DDX42	Q86XP3	938 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	TMPRSS6	Q8IU80	811 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	PDCL2	Q8N4E4	241 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	TMEM161B	Q8NDZ6	487 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SCFD1	Q8WVM8	642 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	KCNB2	Q92953	911 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	WBP2	Q969T9	261 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SIPA1	Q96FS4	1042 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	VCPIP1	Q96JH7	1222 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SPATA17	Q96L03	361 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	JAKMIP1	Q96N16	626 aa	Known RBP	11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	ELF4	Q99607	663 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	ACBD6	Q9BR61	282 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	NTPCR	Q9BSD7	190 aa	Known RBP	11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	TTLL2	Q9BWV7	592 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SEPT3	Q9UH03	358 aa		11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	TP53BP1	Q12888	1972 aa	Predicted RBP	11.17	□□□□□ -0.62
PPP1CA-206	ENST00000529724	KPNA7	A9QM74	516 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CACNG3	O60359	315 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	ITGAV	P06756	1048 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CISD3	P0C7P0	127 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	MAPT	P10636	758 aa	Known RBP	11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	MBL2	P11226	248 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	MUT	P22033	750 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	RPS6KB1	P23443	525 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	ACSL1	P33121	698 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	STRN3	Q13033	797 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	ENPP2	Q13822	863 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	STARD3	Q14849	445 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	TMEM132D	Q14C87	1099 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	BLOC1S2	Q6QNY1	142 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	FAM124A	Q86V42	546 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	OSTM1	Q86WC4	334 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CACUL1	Q86Y37	369 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	LSMEM2	Q8N112	164 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	FAM212A	Q96EL1	285 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	DUSP9	Q99956	384 aa	Known RBP	11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	RUSC1	Q9BVN2	902 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	ADAMTS1	Q9UHI8	967 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	L1RE1	Q9UN81	338 aa		11.16	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CKAP5	Q14008	2032 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	BLACE	A4D250	179 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SFI1	A8K8P3	1242 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CPLX1	O14810	134 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	VILL	O15195	856 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	OGT	O15294	1046 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	TSPAN3	O60637	253 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	DTNB	O60941	627 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CKMT2	P17540	419 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	POU3F2	P20265	443 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CD27	P26842	260 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	MATR3	P43243	847 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	LSS	P48449	732 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	KYAT1	Q16773	422 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	DENND5B	Q6ZUT9	1274 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CD302	Q8IX05	232 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	PRCC	Q92733	491 aa	Predicted RBP	11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	BIRC7	Q96CA5	298 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	C17orf75	Q9HAS0	396 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	DDX43	Q9NXZ2	648 aa	Known RBP	11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CPSF3	Q9UKF6	684 aa	Known RBP	11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	DERA	Q9Y315	318 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	CSMD1	Q96PZ7	3565 aa		11.15	□□□□□ -0.62
PPP1CA-206	ENST00000529724	NEDD8-MDP1	E9PL57	170 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	EFS	O43281	561 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	WNT1	P04628	370 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ABCB4	P21439	1286 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	EPHA8	P29322	1005 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	CDC25A	P30304	524 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	PPP3CC	P48454	512 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ZNF132	P52740	706 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	TOB2	Q14106	344 aa	Predicted RBP	11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ARL13B	Q3SXY8	428 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	SV2C	Q496J9	727 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	SFMBT2	Q5VUG0	894 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	CDCP2	Q5VXM1	449 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	FAM171B	Q6P995	826 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	XKR5	Q6UX68	686 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	CCDC81	Q6ZN84	652 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ADGRF2	Q8IZF7	708 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ERMN	Q8TAM6	284 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	P2RY11	Q96G91	374 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	POLR1B	Q9H9Y6	1135 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	THSD1	Q9NS62	852 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	DPP3	Q9NY33	737 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	MARK1	Q9P0L2	795 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ZFHX3	Q15911	3703 aa		11.14	□□□□□ -0.63
PPP1CA-206	ENST00000529724	DNHD1	Q96M86	4753 aa		11.13	□□□□□ -0.63
PPP1CA-206	ENST00000529724		A0A1W2PNU3	283 aa	Predicted RBP	11.13	□□□□□ -0.63
PPP1CA-206	ENST00000529724	COCH	O43405	550 aa		11.13	□□□□□ -0.63
PPP1CA-206	ENST00000529724	GREM1	O60565	184 aa		11.13	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ATP2C2	O75185	946 aa		11.13	□□□□□ -0.63
PPP1CA-206	ENST00000529724	ABL1	P00519	1130 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms