RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 KDSRQ06136 332 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 SEMA3BQ13214 749 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 KCNB1Q14721 858 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 POSTNQ15063 836 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 DHCR24Q15392 516 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 PIP4P1Q86T03 277 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 RETREG3Q86VR2 466 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 TMEM86AQ8N2M4 240 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 TOP6BLQ8N6T0 577 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 LRRC52Q8N7C0 313 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 GLIS3Q8NEA6 775 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 ZCCHC14Q8WYQ9 949 aaKnown RBP9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 SMARCE1Q969G3 411 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 PCED1BQ96HM7 432 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 FUBP3Q96I24 572 aaKnown RBP eCLIP9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 SYT15Q9BQS2 421 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 TTLL2Q9BWV7 592 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 CD93Q9NPY3 652 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 SMPD4Q9NXE4 827 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 RBAKQ9NYW8 714 aaPredicted RBP9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 IMPACTQ9P2X3 320 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 SERTAD1Q9UHV2 236 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 EVLQ9UI08 416 aaPredicted RBP9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 PCDHA5Q9Y5H7 936 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 CPQQ9Y646 472 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 NBEAQ8NFP9 2946 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 DMXL2Q8TDJ6 3036 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 LAMA5O15230 3695 aa9.09□□□□□ -0.95
TGFBR3-208ENST00000529608 FAM208BQ5VWN6 2430 aa9.09□□□□□ -0.96
TGFBR3-208ENST00000529608 A0A087X0B3 334 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 A0A0A0MRY4 1105 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 ZNF840PA6NDX5 716 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 BIN1O00499 593 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 TNFRSF10BO14763 440 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 CBFA2T2O43439 604 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 KAT7O95251 611 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 OAS1P00973 400 aaKnown RBP9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 PDGFRBP09619 1106 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 TXLNAP40222 546 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 SLC7A9P82251 487 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 MRPS21P82921 87 aaKnown RBP9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 MYL5Q02045 173 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 NR1H3Q13133 447 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 PNOCQ13519 176 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 DPCR1Q3MIW9 517 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 PEAR1Q5VY43 1037 aaPredicted RBP9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 SLC23A3Q6PIS1 610 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 DENND5BQ6ZUT9 1274 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 MIB1Q86YT6 1006 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 IQUBQ8NA54 791 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 SPC24Q8NBT2 197 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 SPATA20Q8TB22 786 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 HVCN1Q96D96 273 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 ERLEC1Q96DZ1 483 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 SPATA17Q96L03 361 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 PNKPQ96T60 521 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 MRPL45Q9BRJ2 306 aaKnown RBP9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 KDM4CQ9H3R0 1056 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 DPEP3Q9H4B8 488 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 MRPL44Q9H9J2 332 aaKnown RBP9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 MAGEC2Q9UBF1 373 aaPredicted RBP9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 PILRBQ9UKJ0 227 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 ITGA11Q9UKX5 1188 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 NEUROG3Q9Y4Z2 214 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 CACNA1GO43497 2377 aa9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 MYO18AQ92614 2054 aaKnown RBP9.08□□□□□ -0.96
TGFBR3-208ENST00000529608 ZFYVE26Q68DK2 2539 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 PCNX2A6NKB5 2137 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 PKD1L2Q7Z442 2459 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 PTPRBP23467 1997 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 TCRBV21S2A2A0A5A6 115 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 F8VP50 259 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 PRPF6O94906 941 aaKnown RBP9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 GCNT3O95395 438 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 CST3P01034 146 aaPredicted RBP9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 GABRG2P18507 467 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 GARTP22102 1010 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 ERCC5P28715 1186 aaPredicted RBP9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 HOXD13P35453 343 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 GRIK1P39086 918 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 LHX1P48742 406 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 PGFP49763 221 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 GSDMDP57764 484 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 SIM1P81133 766 aaPredicted RBP9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 RBP5P82980 135 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 CYP27A1Q02318 531 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 TAF10Q12962 218 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 NCAPHQ15003 741 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 MDH1BQ5I0G3 518 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 LY6G5CQ5SRR4 150 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 VSTM1Q6UX27 236 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 LPCAT2Q7L5N7 544 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 CCDC186Q7Z3E2 898 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 C11orf74Q86VG3 221 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 CBWD2Q8IUF1 395 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 SYT12Q8IV01 421 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 SLC41A1Q8IVJ1 513 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 CHCHD4Q8N4Q1 142 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 NAT16Q8N8M0 369 aa9.07□□□□□ -0.96
TGFBR3-208ENST00000529608 RASSF8Q8NHQ8 419 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms