RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 SMARCB1Q12824 385 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CSTF3Q12996 717 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 COASYQ13057 564 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ITGB3BPQ13352 177 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 DYNC1I2Q13409 638 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SNAPC2Q13487 334 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 RIPK1Q13546 671 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PWP1Q13610 501 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CUL4AQ13619 759 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ERV3-1Q14264 604 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 HABP2Q14520 560 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CASP8Q14790 479 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 HERC3Q15034 1050 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ACAP2Q15057 778 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 TAF12Q16514 161 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 MAP3K11Q16584 847 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 NFIL3Q16649 462 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 AOC3Q16853 763 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 LONRF2Q1L5Z9 754 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SLC10A6Q3KNW5 377 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PABPC1LQ4VXU2 614 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 HSP90AA4PQ58FG1 418 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 TMEM67Q5HYA8 995 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 EFHC1Q5JVL4 640 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 C1orf141Q5JVX7 400 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 VWA5B1Q5TIE3 1220 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 FBXW10Q5XX13 1052 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 OLFML2BQ68BL8 750 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CENPPQ6IPU0 288 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CEP85Q6P2H3 762 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 B3GNT9Q6UX72 402 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 KDM7AQ6ZMT4 941 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PTCHD4Q6ZW05 846 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 DYMQ7RTS9 669 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 HDXQ7Z353 690 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 KRT27Q7Z3Y8 459 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PIWIL3Q7Z3Z3 882 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 AKAP14Q86UN6 197 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SLC51BQ86UW2 128 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 STX12Q86Y82 276 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZDHHC17Q8IUH5 632 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 APLFQ8IW19 511 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 MAML2Q8IZL2 1156 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CARFQ8N187 725 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZNF321PQ8N8H1 164 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 LPCAT1Q8NF37 534 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PIP4K2CQ8TBX8 421 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ENKURQ8TC29 256 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 GRK7Q8WTQ7 553 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 METTL21AQ8WXB1 218 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 DDX1Q92499 740 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 STARD8Q92502 1023 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 WASF1Q92558 559 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SLC9A6Q92581 669 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SYN2Q92777 582 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SLC22A18Q96BI1 424 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZNF653Q96CK0 615 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 RRP36Q96EU6 259 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 FUBP3Q96I24 572 aaKnown RBP eCLIP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 VCPIP1Q96JH7 1222 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 EXOC2Q96KP1 924 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 EGLN2Q96KS0 407 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZSCAN31Q96LW9 406 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 RIPOR3Q96MK2 946 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 AIFM3Q96NN9 605 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 NECAB3Q96P71 396 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PKP4Q99569 1192 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 TTC1Q99614 292 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PIP5K1AQ99755 562 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CIB1Q99828 191 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 HAUS8Q9BT25 410 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 NOC4LQ9BVI4 516 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PUS3Q9BZE2 481 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 TTYH3Q9C0H2 523 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZCWPW1Q9H0M4 648 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ISCUQ9H1K1 167 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CARD9Q9H257 536 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 GSX1Q9H4S2 264 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CCDC86Q9H6F5 360 aaKnown RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 LRRC19Q9H756 370 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SYNDIG1Q9H7V2 258 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CBX8Q9HC52 389 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ARFGAP3Q9NP61 516 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 PRDM7Q9NQW5 492 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ZBTB40Q9NUA8 1239 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 HAUS2Q9NVX0 235 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 POLR3BQ9NW08 1133 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP2.92□□□□□ -1.943e-18■■■□□ 16.5
FDFT1-216ENST00000529521 COQ3Q9NZJ6 369 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 AKAP7Q9P0M2 348 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 COX16Q9P0S2 106 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 KLHL9Q9P2J3 617 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SUCLA2Q9P2R7 463 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 UBA2Q9UBT2 640 aaPredicted RBP2.92□□□□□ -1.94
FDFT1-216ENST00000529521 CD300AQ9UGN4 299 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 TRPS1Q9UHF7 1281 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SLC7A8Q9UHI5 535 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 SLC13A4Q9UKG4 626 aa2.92□□□□□ -1.94
FDFT1-216ENST00000529521 ANGPTL2Q9UKU9 493 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms