RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 RALAP11233 206 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 LMNB2Q03252 620 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 CETN1Q12798 172 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 CAMK4Q16566 473 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 GOLGA7BQ2TAP0 167 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 TTI2Q6NXR4 508 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 SYT13Q7L8C5 426 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 C12orf40Q86WS4 652 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 TTC30AQ86WT1 665 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 CAMKK1Q8N5S9 505 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 CYLDQ9NQC7 956 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 ARHGEF4Q9NR80 690 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 SPHK2Q9NRA0 654 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 HESX1Q9UBX0 185 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 DNMT3LQ9UJW3 386 aa20.29■□□□□ 0.84
CAPN1-211ENST00000527739 CDV3Q9UKY7 258 aaKnown RBP20.29■□□□□ 0.84
CAPN1-211ENST00000527739 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.29■□□□□ 0.84
CAPN1-211ENST00000527739 SPTBN2O15020 2390 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 ANTXRLA6NF34 631 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 PRR5-ARHGAP8B1AHC4 643 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-211ENST00000527739 AXIN1O15169 862 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 RPP40O75818 363 aaKnown RBP20.28■□□□□ 0.84
CAPN1-211ENST00000527739 KAT7O95251 611 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 RETP07949 1114 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 TBXAS1P24557 533 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-211ENST00000527739 ARHGAP8P85298 464 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 SGO2Q562F6 1265 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 ARHGAP17Q68EM7 881 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 TADA2BQ86TJ2 420 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 PIGZQ86VD9 579 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 TMEM25Q86YD3 366 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 MIB1Q86YT6 1006 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 CREBRFQ8IUR6 639 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 ANKRD52Q8NB46 1076 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 USP33Q8TEY7 942 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 NT5C1BQ96P26 610 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 FAM124BQ9H5Z6 455 aaPredicted RBP20.28■□□□□ 0.84
CAPN1-211ENST00000527739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.28■□□□□ 0.84
CAPN1-211ENST00000527739 CHMP5Q9NZZ3 219 aa20.28■□□□□ 0.84
CAPN1-211ENST00000527739 TBC1D3BA6NDS4 549 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 APBB3O95704 486 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 TIE1P35590 1138 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 GRIA2P42262 883 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 PLA2G4AP47712 749 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 PSEN1P49768 467 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 DGKEP52429 567 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 PAK1Q13153 545 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 TPGS1Q6ZTW0 290 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 HTR3DQ70Z44 454 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 RSRC2Q7L4I2 434 aaKnown RBP20.27■□□□□ 0.84
CAPN1-211ENST00000527739 CCDC186Q7Z3E2 898 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 SCD5Q86SK9 330 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 SFTPA1Q8IWL2 248 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 TSTD1Q8NFU3 115 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 GAB3Q8WWW8 586 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 SRRTQ9BXP5 876 aaKnown RBP20.27■□□□□ 0.84
CAPN1-211ENST00000527739 RASAL2Q9UJF2 1139 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 PCDHB4Q9Y5E5 795 aa20.27■□□□□ 0.84
CAPN1-211ENST00000527739 CCDC163A0A0D9SF12 145 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 HMBSP08397 361 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 SDHBP21912 280 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 EIF2DP41214 584 aaKnown RBP20.26■□□□□ 0.83
CAPN1-211ENST00000527739 TKTL1P51854 596 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 UBE2HP62256 183 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 MESP2Q0VG99 397 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 EFEMP1Q12805 493 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 EMC10Q5UCC4 262 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 TMEM270Q6UE05 265 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 CACNA2D4Q7Z3S7 1137 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 PPM1KQ8N3J5 372 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 FAM160A2Q8N612 972 aaPredicted RBP20.26■□□□□ 0.83
CAPN1-211ENST00000527739 UBA3Q8TBC4 463 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 UBXN6Q9BZV1 441 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 LRRC4Q9HBW1 653 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 DEC1Q9P2X7 70 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 TSPAN16Q9UKR8 245 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 USP3Q9Y6I4 520 aa20.26■□□□□ 0.83
CAPN1-211ENST00000527739 NEDD8-MDP1E9PL57 170 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 KLF8O95600 359 aaPredicted RBP20.25■□□□□ 0.83
CAPN1-211ENST00000527739 GNA14O95837 355 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 VDRP11473 427 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 MRPS21P82921 87 aaKnown RBP20.25■□□□□ 0.83
CAPN1-211ENST00000527739 PDE4CQ08493 712 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 NUDT18Q6ZVK8 323 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 ARHGAP18Q8N392 663 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 ALLCQ8N6M5 410 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 CDK5RAP1Q96SZ6 601 aaKnown RBP20.25■□□□□ 0.83
CAPN1-211ENST00000527739 RTKNQ9BST9 563 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 BBS2Q9BXC9 721 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 ZDHHC4Q9NPG8 344 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 CLIC5Q9NZA1 410 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 INVSQ9Y283 1065 aa20.25■□□□□ 0.83
CAPN1-211ENST00000527739 TULP2O00295 520 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 HOXC11O43248 304 aaPredicted RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 TULP3O75386 442 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 FGFR1OPO95684 399 aaKnown RBP20.24■□□□□ 0.83
CAPN1-211ENST00000527739 ZBED1O96006 694 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 TNFRSF4P43489 277 aa20.24■□□□□ 0.83
CAPN1-211ENST00000527739 BCAT1P54687 386 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms