RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 DENND1BQ6P3S1 775 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 NPNTQ6UXI9 565 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 POLNQ7Z5Q5 900 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
CAPN1-208ENST00000527323 NUDCD3Q8IVD9 361 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 THNSL1Q8IYQ7 743 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 GALNT15Q8N3T1 639 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 RBM15BQ8NDT2 890 aaKnown RBP13□□□□□ -0.33
CAPN1-208ENST00000527323 FBXO27Q8NI29 283 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 E2F7Q96AV8 911 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 ZNF518BQ9C0D4 1074 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 KRT82Q9NSB4 513 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 PTPRFP10586 1907 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 KIAA1217Q5T5P2 1943 aa13□□□□□ -0.33
CAPN1-208ENST00000527323 A0A0B4J269 797 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 CXCL11O14625 94 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 KRT37O76014 449 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 RNF8O76064 485 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 TNFSF9P41273 254 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 GCLCP48506 637 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 IGBP1P78318 339 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 SLC18A2Q05940 514 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 BST1Q10588 318 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 TAF5Q15542 800 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 HSDL1Q3SXM5 330 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 LGSNQ5TDP6 509 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ATG16L1Q676U5 607 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 CDHR3Q6ZTQ4 885 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 SLC26A11Q86WA9 606 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 TREML1Q86YW5 311 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 PPP1R14CQ8TAE6 165 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 GPRASP2Q96D09 838 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 WDR35Q9P2L0 1181 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ASS1P00966 412 aaKnown RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 OSBPP22059 807 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 EIF4BP23588 611 aaKnown RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ZNF132P52740 706 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 AQP5P55064 265 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 IRX4P78413 519 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ROR1Q01973 937 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 TTC39BQ5VTQ0 682 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 IZUMO2Q6UXV1 221 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 RIPOR1Q6ZS17 1223 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 TRIM42Q8IWZ5 723 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 KBTBD2Q8IY47 623 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 SLC25A41Q8N5S1 370 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ARFGAP1Q8N6T3 406 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 SLC7A3Q8WY07 619 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 FRMD8P1Q9BZ68 369 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 PHACTR1Q9C0D0 580 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ARHGAP39Q9C0H5 1083 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 NIF3L1Q9GZT8 377 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 RAB6BQ9NRW1 208 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 KCNH4Q9UQ05 1017 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 EFR3BQ9Y2G0 817 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 STYXL1Q9Y6J8 313 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 CNTNAP2Q9UHC6 1331 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ARHGAP42A6NI28 874 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 SMAPO00193 183 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 SNRPAP09012 282 aaKnown RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ANPEPP15144 967 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 KCNA2P16389 499 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 ADORA2AP29274 412 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 AP2B1P63010 937 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 SLC25A11Q02978 314 aaKnown RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 BMPR2Q13873 1038 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 NBPF20Q3BBV1 942 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 PTPN20Q4JDL3 420 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 FAXCQ5TGI0 409 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 CRLF3Q8IUI8 442 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 KIAA0319LQ8IZA0 1049 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 NIPA2Q8N8Q9 360 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-208ENST00000527323 WWP1Q9H0M0 922 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 NDE1Q9NXR1 346 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 KCNK4Q9NYG8 393 aa12.99□□□□□ -0.33
CAPN1-208ENST00000527323 CYB561D2O14569 222 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 CYP2B6P20813 491 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 MMRN1Q13201 1228 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 FASTKD5Q7L8L6 764 aaKnown RBP12.98□□□□□ -0.33
CAPN1-208ENST00000527323 DPH6Q7L8W6 267 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 DPP9Q86TI2 863 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.98□□□□□ -0.33
CAPN1-208ENST00000527323 MTBPQ96DY7 904 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 TAGLN3Q9UI15 199 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-208ENST00000527323 APOC4-APOC2K7ER74 178 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 MAFGO15525 162 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 MAGEC1O60732 1142 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 APOC2P02655 101 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 TSHRP16473 764 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 RAB27AP51159 221 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 YWHAEP62258 255 aaKnown RBP12.98□□□□□ -0.33
CAPN1-208ENST00000527323 ORC1Q13415 861 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 TAF1CQ15572 869 aaPredicted RBP12.98□□□□□ -0.33
CAPN1-208ENST00000527323 STXBP2Q15833 593 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 CCL14Q16627 93 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 SAPCD2Q86UD0 394 aa12.98□□□□□ -0.33
CAPN1-208ENST00000527323 GATA6Q92908 595 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms