RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 SNX16P57768 344 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 SDHAF4Q5VUM1 108 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 DAB2IPQ5VWQ8 1189 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 PLPP4Q5VZY2 271 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 RHOT1Q8IXI2 618 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 MRPL43Q8N983 215 aaKnown RBP19.66■□□□□ 0.74
SMPD1-203ENST00000527275 MICAL1Q8TDZ2 1067 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 CLEC4CQ8WTT0 213 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 WDR35Q9P2L0 1181 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 AFF4Q9UHB7 1163 aaKnown RBP19.66■□□□□ 0.74
SMPD1-203ENST00000527275 USTQ9Y2C2 406 aa19.66■□□□□ 0.74
SMPD1-203ENST00000527275 TTI1O43156 1089 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 MAN1A1P33908 653 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 TKTL1P51854 596 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 GSCP56915 257 aaPredicted RBP19.65■□□□□ 0.74
SMPD1-203ENST00000527275 RAB41Q5JT25 222 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 PPP1R15BQ5SWA1 713 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 TPGS2Q68CL5 300 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 ZDHHC14Q8IZN3 488 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 PRELID2Q8N945 189 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 MCRS1Q96EZ8 462 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 MCEEQ96PE7 176 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 PRO3102Q9H379 93 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 PNPLA8Q9NP80 782 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 SZT2Q5T011 3432 aa19.65■□□□□ 0.74
SMPD1-203ENST00000527275 BHMG1C9JSJ3 638 aaPredicted RBP19.64■□□□□ 0.74
SMPD1-203ENST00000527275 H3BNC9 293 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 PSTPIP1O43586 416 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 IRS1P35568 1242 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 TAS2R40P59535 323 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 CREMQ03060 361 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 GPS2Q13227 327 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 GPM6BQ13491 265 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 TAF5Q15542 800 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 FAM102AQ5T9C2 384 aaPredicted RBP19.64■□□□□ 0.74
SMPD1-203ENST00000527275 OLFML1Q6UWY5 402 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 SIX6OS1Q8N1H7 587 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 STKLD1Q8NE28 680 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 SCAMP5Q8TAC9 235 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 GPR152Q8TDT2 470 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 ARNTL2Q8WYA1 636 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 NDRG1Q92597 394 aaKnown RBP19.64■□□□□ 0.74
SMPD1-203ENST00000527275 CAVIN3Q969G5 261 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 ACBD3Q9H3P7 528 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 LCMT1Q9UIC8 334 aa19.64■□□□□ 0.74
SMPD1-203ENST00000527275 TCRBV7S2A1N4TA0A589 114 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 C2orf71A6NGG8 1288 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 TRIM66O15016 1216 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 PHF2O75151 1096 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 SEC24AO95486 1093 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 HAPLN1P10915 354 aaPredicted RBP19.64■□□□□ 0.73
SMPD1-203ENST00000527275 KRT3P12035 628 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 SSR1P43307 286 aaKnown RBP19.64■□□□□ 0.73
SMPD1-203ENST00000527275 MAGOHBQ96A72 148 aaKnown RBP19.64■□□□□ 0.73
SMPD1-203ENST00000527275 C8orf48Q96LL4 319 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 HPCAL4Q9UM19 191 aa19.64■□□□□ 0.73
SMPD1-203ENST00000527275 SIGLEC16A6NMB1 481 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 TNFRSF10BO14763 440 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 FSCN2O14926 492 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 GRAP2O75791 330 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 CHRNA3P32297 505 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 RFC1P35251 1148 aaPredicted RBP19.63■□□□□ 0.73
SMPD1-203ENST00000527275 DR1Q01658 176 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 SLC6A3Q01959 620 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 ZDHHC17Q8IUH5 632 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 EIF1ADQ8N9N8 165 aaKnown RBP19.63■□□□□ 0.73
SMPD1-203ENST00000527275 KLHL5Q96PQ7 755 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 ULBP1Q9BZM6 244 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 CYP4F11Q9HBI6 524 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 NGRNQ9NPE2 291 aaKnown RBP19.63■□□□□ 0.73
SMPD1-203ENST00000527275 METTL5Q9NRN9 209 aaKnown RBP19.63■□□□□ 0.73
SMPD1-203ENST00000527275 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMPD1-203ENST00000527275 UTP11Q9Y3A2 253 aaKnown RBP19.63■□□□□ 0.73
SMPD1-203ENST00000527275 SPATA31D3P0C874 917 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 RARAP10276 462 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 SLC5A3P53794 718 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 CUL1Q13616 776 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 SPATA31D4Q6ZUB0 917 aa19.63■□□□□ 0.73
SMPD1-203ENST00000527275 KHSRPQ92945 711 aaKnown RBP eCLIP19.63■□□□□ 0.73
SMPD1-203ENST00000527275 ADH1AP07327 375 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 USP17L7P0C7H9 530 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 OGDHQ02218 1023 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 IFRD2Q12894 506 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-203ENST00000527275 NNTQ13423 1086 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 DHX34Q14147 1143 aaKnown RBP19.62■□□□□ 0.73
SMPD1-203ENST00000527275 PIGHQ14442 188 aaPredicted RBP19.62■□□□□ 0.73
SMPD1-203ENST00000527275 LLGL1Q15334 1064 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 EMC1Q8N766 993 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 JOSD2Q8TAC2 188 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.62■□□□□ 0.73
SMPD1-203ENST00000527275 EMILIN2Q9BXX0 1053 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 CNGB3Q9NQW8 809 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 TRIOBPQ9H2D6 2365 aa19.62■□□□□ 0.73
SMPD1-203ENST00000527275 FAM187AA6NFU0 413 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 TGM5O43548 720 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 FAM153BP0C7A2 387 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 ATF6P18850 670 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 KLRC2P26717 231 aa19.61■□□□□ 0.73
SMPD1-203ENST00000527275 TUFMP49411 452 aaKnown RBP19.61■□□□□ 0.73
SMPD1-203ENST00000527275 MRPS5P82675 430 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms