RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 TRAPPC11Q7Z392 1133 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 GLRX5Q86SX6 157 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 WDR49Q8IV35 697 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 ZCCHC9Q8N567 271 aaKnown RBP13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 B3GALNT2Q8NCR0 500 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 KCNK16Q96T55 309 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 GABRG3Q99928 467 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 BBS2Q9BXC9 721 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 MIR1-1HGQ9H1L0 117 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 IL21RQ9HBE5 538 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 SCUBE2Q9NQ36 999 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 GMIPQ9P107 970 aa13.79□□□□□ -0.2
CLNS1A-207ENST00000527133 A0A1B0GTW7 788 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 A8MXQ7 604 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 KIAA0391O15091 583 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 CACNG3O60359 315 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 CST3P01034 146 aaPredicted RBP13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 DLATP10515 647 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 TYRP14679 529 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 CD6P30203 668 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 TUBP50607 506 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 SLC5A3P53794 718 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 WDR72Q3MJ13 1102 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 SNX30Q5VWJ9 437 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 TPGS1Q6ZTW0 290 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 MARCH9Q86YJ5 346 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 COL26A1Q96A83 441 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 TOE1Q96GM8 510 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 XPO6Q96QU8 1125 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 DUSP9Q99956 384 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 MED10Q9BTT4 135 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 PANK4Q9NVE7 773 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 PTPRBP23467 1997 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 ASXL3Q9C0F0 2248 aa13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 URB1O60287 2271 aaKnown RBP13.78□□□□□ -0.2
CLNS1A-207ENST00000527133 GOLGA8CPA6NN73 597 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 WASH3PC4AMC7 463 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 ATP8B3O60423 1300 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 NCAM1P13591 858 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 TNNI1P19237 187 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 TMPRSS7Q7RTY8 843 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 FAM35AQ86V20 835 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 GLIS3Q8NEA6 775 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 DNASE2BQ8WZ79 361 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 BHMTQ93088 406 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 TMX3Q96JJ7 454 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 GPR174Q9BXC1 333 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 GAREM1Q9H706 876 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 PRDM16Q9HAZ2 1276 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 TM7SF3Q9NS93 570 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 HSPBP1Q9NZL4 362 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 KIAA1522Q9P206 1035 aaPredicted RBP13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 WDR35Q9P2L0 1181 aa13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 FNDC3AQ9Y2H6 1198 aaKnown RBP13.77□□□□□ -0.21
CLNS1A-207ENST00000527133 FRMD3A2A2Y4 597 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 TLR5O60602 858 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 CILPO75339 1184 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 CER1O95813 267 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 TBX18O95935 607 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 FAM163BP0C2L3 166 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 ATXN1LP0C7T5 689 aaKnown RBP13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 ZDHHC11BP0C7U3 371 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 TXLNAP40222 546 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 MATKP42679 507 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 DGKGP49619 791 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 PGFP49763 221 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 CYP4F3Q08477 520 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 FUT11Q495W5 492 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 LARP1BQ659C4 914 aaKnown RBP13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 HTR3DQ70Z44 454 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 BRAPQ7Z569 592 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 RDH13Q8NBN7 331 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 HPS3Q969F9 1004 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 CCDC127Q96BQ5 260 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 CRELD1Q96HD1 420 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 CLIC6Q96NY7 704 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 DMAP1Q9NPF5 467 aaPredicted RBP13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 TOR4AQ9NXH8 423 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 WSB2Q9NYS7 404 aaPredicted RBP13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 DKK4Q9UBT3 224 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 FBXO2Q9UK22 296 aaPredicted RBP13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 CLIC4Q9Y696 253 aa13.76□□□□□ -0.21
CLNS1A-207ENST00000527133 TRABD2BA6NFA1 517 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 GFRA2O00451 464 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 GREM1O60565 184 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 STAT6P42226 847 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 MYL6P60660 151 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 BNC1Q01954 994 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 STARD3Q14849 445 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 SNRNP35Q16560 246 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 HLA-BQ31612 363 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 DCAF12L1Q5VU92 463 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 PAQR9Q6ZVX9 377 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 BAHD1Q8TBE0 780 aaPredicted RBP13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 RHBDD1Q8TEB9 315 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 CDC6Q99741 560 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 KLF16Q9BXK1 252 aaPredicted RBP13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 PANK2Q9BZ23 570 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms