RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 BLOC1S2Q6QNY1 142 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 DLK2Q6UY11 383 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 GADL1Q6ZQY3 521 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 RUFY3Q7L099 469 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 TBC1D10CQ8IV04 446 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 FITM2Q8N6M3 262 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 NSUN6Q8TEA1 469 aaKnown RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 ESR2Q92731 530 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 MYEOVQ96EZ4 313 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 CDCA5Q96FF9 252 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 CCDC17Q96LX7 622 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 JAKMIP1Q96N16 626 aaKnown RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 NUP88Q99567 741 aaPredicted RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 GLIS2Q9BZE0 524 aaPredicted RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 GSTO2Q9H4Y5 243 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 FBXO34Q9NWN3 711 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 IP6K2Q9UHH9 426 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 LAMA4Q16363 1823 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 COL2A1P02458 1487 aaPredicted RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 ERICH2A1L162 156 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 MPHOSPH10O00566 681 aaKnown RBP5.12□□□□□ -1.59
USP48-211ENST00000526044 ORC4O43929 436 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 CTNND1O60716 968 aaKnown RBP5.12□□□□□ -1.59
USP48-211ENST00000526044 DTNBO60941 627 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 NCR1O76036 304 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 TOMM70O94826 608 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 ABLIM3O94929 683 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 POU2F2P09086 479 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 CKBP12277 381 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 CASTP20810 708 aaKnown RBP5.12□□□□□ -1.59
USP48-211ENST00000526044 GCSHP23434 173 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 RPS6KB1P23443 525 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 SLC6A2P23975 617 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 SHMT1P34896 483 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 BMPR1AP36894 532 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 MCL1Q07820 350 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 RABEP1Q15276 862 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 PABPC1LQ4VXU2 614 aaKnown RBP5.12□□□□□ -1.59
USP48-211ENST00000526044 THEMIS2Q5TEJ8 643 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 STOX1Q6ZVD7 989 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 USP45Q70EL2 814 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 RHOUQ7L0Q8 258 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 CHST3Q7LGC8 479 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 ARMC9Q7Z3E5 817 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 MRGPREQ86SM8 312 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 IQCA1Q86XH1 822 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 TMTC2Q8N394 836 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 PRR18Q8N4B5 295 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 DCBLD1Q8N8Z6 715 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 SLC44A5Q8NCS7 719 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 IL17RDQ8NFM7 739 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 OR56A1Q8NGH5 318 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 TTC14Q96N46 770 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 DMRTA2Q96SC8 542 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 NEU1Q99519 415 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 TEX101Q9BY14 249 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 PDRG1Q9NUG6 133 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 KLHL11Q9NVR0 708 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 ZNF112Q9UJU3 913 aa5.12□□□□□ -1.59
USP48-211ENST00000526044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.12□□□□□ -1.59
USP48-211ENST00000526044 LAMB1P07942 1786 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 TMEM200CA6NKL6 621 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 UBE2Q2LH0YL09 131 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 IFIT3O14879 490 aaKnown RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 GRM6O15303 877 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 PRC1O43663 620 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 NDUFA10O95299 355 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 ABHD16AO95870 558 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 GH2P01242 217 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 ASNSP08243 561 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 PF4V1P10720 104 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 CPA1P15085 419 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 AKR1B1P15121 316 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 ZFP36P26651 326 aaKnown RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 EPHB1P54762 984 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 MXRA7P84157 204 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 PURAQ00577 322 aaKnown RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 TLE1Q04724 770 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 FHL2Q14192 279 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 SMN1Q16637 294 aaKnown RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 BEAN1Q3B7T3 259 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 KHDC1Q4VXA5 237 aaKnown RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 LY6G5CQ5SRR4 150 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 SYNE3Q6ZMZ3 975 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 LRRC55Q6ZSA7 311 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 TMEM179Q6ZVK1 233 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 CYB5R4Q7L1T6 521 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 DGKHQ86XP1 1220 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 MB21D2Q8IYB1 491 aaPredicted RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 C3orf20Q8ND61 904 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 UBAC1Q9BSL1 405 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 UPF3BQ9BZI7 483 aaKnown RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 ALDH8A1Q9H2A2 487 aaPredicted RBP5.11□□□□□ -1.59
USP48-211ENST00000526044 RNPEPQ9H4A4 650 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 DNAJC18Q9H819 358 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 TCP11L1Q9NUJ3 509 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 CLIP2Q9UDT6 1046 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 POLHQ9Y253 713 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 NEDD4P46934 1319 aa5.11□□□□□ -1.59
USP48-211ENST00000526044 WDR19Q8NEZ3 1342 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms