RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 LRRC4Q9HBW1 653 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 DNMT3LQ9UJW3 386 aa19.45■□□□□ 0.7
TSPAN4-215ENST00000525334 M0QYV0 167 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 MBD3O95983 291 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 ZBED1O96006 694 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 RALAP11233 206 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 KRT5P13647 590 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 DRD1P21728 446 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 MFAP3P55082 362 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 SATB1Q01826 763 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 ADIGQ0VDE8 80 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 STILQ15468 1287 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 PM20D1Q6GTS8 502 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 RHBDF2Q6PJF5 856 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 ENOSF1Q7L5Y1 443 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 BHLHA9Q7RTU4 235 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 TADA2BQ86TJ2 420 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 BBS7Q8IWZ6 715 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 ARHGAP18Q8N392 663 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 ZNF276Q8N554 614 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 KCTD13Q8WZ19 329 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 NELL1Q92832 810 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 SECISBP2LQ93073 1101 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 OTUB2Q96DC9 234 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 TUBGCP2Q9BSJ2 902 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 SAMSN1Q9NSI8 373 aaKnown RBP19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 APEX2Q9UBZ4 518 aa19.44■□□□□ 0.7
TSPAN4-215ENST00000525334 FANCMQ8IYD8 2048 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 KCNJ18B7U540 433 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 GREM1O60565 184 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 ADH1CP00326 375 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 TDGF1P13385 188 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 PRKCSHP14314 528 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 PON1P27169 355 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 OPRD1P41143 372 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 CXCL12P48061 93 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 YWHAGP61981 247 aaKnown RBP eCLIP19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 GOLGA8FQ08AF8 430 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 GOLGA8DPQ0D2H9 430 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 KCNJ12Q14500 433 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 VWA3BQ502W6 1294 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 MIIPQ5JXC2 388 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 ZC3H14Q6PJT7 736 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 SLC35F5Q8WV83 523 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 NDRG1Q92597 394 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 EZH1Q92800 747 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 FAM81BQ96LP2 452 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 CDK5RAP1Q96SZ6 601 aaKnown RBP19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 NDST4Q9H3R1 872 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 C2orf42Q9NWW7 574 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 NFE2L3Q9Y4A8 694 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 FAM186AA6NE01 2351 aa19.43■□□□□ 0.7
TSPAN4-215ENST00000525334 RNF40O75150 1001 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 ADH5P11766 374 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 RGS7P49802 495 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 PPP2R5DQ14738 602 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 ARHGAP44Q17R89 818 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 LY6G5CQ5SRR4 150 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 PMF1Q6P1K2 205 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 PKN3Q6P5Z2 889 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 HTR3DQ70Z44 454 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 MIB1Q86YT6 1006 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 SIX6OS1Q8N1H7 587 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 ENOX1Q8TC92 643 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 SIX2Q9NPC8 291 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 RASAL2Q9UJF2 1139 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 LSM7Q9UK45 103 aaKnown RBP19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 WDR87Q6ZQQ6 2873 aa19.42■□□□□ 0.7
TSPAN4-215ENST00000525334 BECN2A8MW95 431 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 GABBR2O75899 941 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 LMNAP02545 664 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 LCP1P13796 627 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 EFEMP1Q12805 493 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 TCP11X2Q5H9J9 407 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 CCDC183Q5T5S1 534 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 SASS6Q6UVJ0 657 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 C11orf57Q6ZUT1 292 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 RSRC2Q7L4I2 434 aaKnown RBP19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 C12orf40Q86WS4 652 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 ZBTB44Q8NCP5 570 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 CNGB3Q9NQW8 809 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 ZSCAN32Q9NX65 697 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 AJAP1Q9UKB5 411 aaPredicted RBP19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 PCDHGA2Q9Y5H1 932 aa19.41■□□□□ 0.7
TSPAN4-215ENST00000525334 YJEFN3A6XGL0 299 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 E7ENQ6 273 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 PIK3R2O00459 728 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 STC2O76061 302 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 LETM1O95202 739 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 PAPSS2O95340 614 aaPredicted RBP19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 EEF1GP26641 437 aaKnown RBP19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 SLC6A11P48066 632 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 DAOAP59103 153 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 GAD2Q05329 585 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 FBXO43Q4G163 708 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 BTBD8Q5XKL5 378 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 SCML4Q8N228 414 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 ATRIPQ8WXE1 791 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 SHC3Q92529 594 aa19.4■□□□□ 0.7
TSPAN4-215ENST00000525334 FAM126AQ9BYI3 521 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms