RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 C12orf40Q86WS4 652 aa19.53■□□□□ 0.72
CAPN1-203ENST00000525013 NAT16Q8N8M0 369 aa19.53■□□□□ 0.72
CAPN1-203ENST00000525013 ANKRD52Q8NB46 1076 aa19.53■□□□□ 0.72
CAPN1-203ENST00000525013 KLF16Q9BXK1 252 aaPredicted RBP19.53■□□□□ 0.72
CAPN1-203ENST00000525013 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.53■□□□□ 0.72
CAPN1-203ENST00000525013 LSM7Q9UK45 103 aaKnown RBP19.53■□□□□ 0.72
CAPN1-203ENST00000525013 EML5Q05BV3 1969 aa19.53■□□□□ 0.72
CAPN1-203ENST00000525013 K7EQS6 105 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 KAT7O95251 611 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 APODP05090 189 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 ID4P47928 161 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 KDSRQ06136 332 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 SCD5Q86SK9 330 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 TADA2BQ86TJ2 420 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 TMEM25Q86YD3 366 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 MIB1Q86YT6 1006 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 PPM1KQ8N3J5 372 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 CAMKK1Q8N5S9 505 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 USP33Q8TEY7 942 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 SRRTQ9BXP5 876 aaKnown RBP19.52■□□□□ 0.72
CAPN1-203ENST00000525013 UBXN6Q9BZV1 441 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 ARHGEF4Q9NR80 690 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 SPHK2Q9NRA0 654 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 HESX1Q9UBX0 185 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 TSPAN16Q9UKR8 245 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 USP18Q9UMW8 372 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 USP3Q9Y6I4 520 aa19.52■□□□□ 0.72
CAPN1-203ENST00000525013 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.51■□□□□ 0.71
CAPN1-203ENST00000525013 PMM2O15305 246 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 RPP40O75818 363 aaKnown RBP19.51■□□□□ 0.71
CAPN1-203ENST00000525013 GNA14O95837 355 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 EIF2DP41214 584 aaKnown RBP19.51■□□□□ 0.71
CAPN1-203ENST00000525013 PLA2G4AP47712 749 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 MESP2Q0VG99 397 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 KLHDC10Q6PID8 442 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 TMEM270Q6UE05 265 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 HTR3DQ70Z44 454 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 TTC30AQ86WT1 665 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 SFTPA1Q8IWL2 248 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 CCDC33Q8N5R6 958 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 GPR161Q8N6U8 529 aaKnown RBP19.51■□□□□ 0.71
CAPN1-203ENST00000525013 TRIML1Q8N9V2 468 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 CLIC5Q9NZA1 410 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 KIAA1468Q9P260 1216 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 PCDHB4Q9Y5E5 795 aa19.51■□□□□ 0.71
CAPN1-203ENST00000525013 CCDC163A0A0D9SF12 145 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 ANTXRLA6NF34 631 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 AXIN1O15169 862 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 FGFR1OPO95684 399 aaKnown RBP19.5■□□□□ 0.71
CAPN1-203ENST00000525013 APBB3O95704 486 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 RETP07949 1114 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 CCDC192P0DO97 292 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 VDRP11473 427 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 GRIA2P42262 883 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 TKTL1P51854 596 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 BCAT1P54687 386 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 PDE4CQ08493 712 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 KCNH2Q12809 1159 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 RSRC2Q7L4I2 434 aaKnown RBP19.5■□□□□ 0.71
CAPN1-203ENST00000525013 CREBRFQ8IUR6 639 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 ARHGAP18Q8N392 663 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 UBA3Q8TBC4 463 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 GAB3Q8WWW8 586 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 CDK5RAP1Q96SZ6 601 aaKnown RBP19.5■□□□□ 0.71
CAPN1-203ENST00000525013 LRRC4Q9HBW1 653 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 DEC1Q9P2X7 70 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 RASAL2Q9UJF2 1139 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 KIAA1257Q9ULG3 409 aa19.5■□□□□ 0.71
CAPN1-203ENST00000525013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.5■□□□□ 0.71
CAPN1-203ENST00000525013 TULP2O00295 520 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 XPO1O14980 1071 aaKnown RBP19.49■□□□□ 0.71
CAPN1-203ENST00000525013 P4HA2O15460 535 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 HOXC11O43248 304 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-203ENST00000525013 TIE1P35590 1138 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 MRPS21P82921 87 aaKnown RBP19.49■□□□□ 0.71
CAPN1-203ENST00000525013 SPEM2Q0P670 501 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 BST2Q10589 180 aaKnown RBP19.49■□□□□ 0.71
CAPN1-203ENST00000525013 EFEMP1Q12805 493 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 RAB41Q5JT25 222 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 TPGS1Q6ZTW0 290 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 RRAGAQ7L523 313 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 TRIM59Q8IWR1 403 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 ZNF276Q8N554 614 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 FAM160A2Q8N612 972 aaPredicted RBP19.49■□□□□ 0.71
CAPN1-203ENST00000525013 UBR7Q8N806 425 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 TSTD1Q8NFU3 115 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 KAT5Q92993 513 aa19.49■□□□□ 0.71
CAPN1-203ENST00000525013 ABCA7Q8IZY2 2146 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 TBC1D3BA6NDS4 549 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 GREM1O60565 184 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 TULP3O75386 442 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 KLF8O95600 359 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-203ENST00000525013 ZBED1O96006 694 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 AFPP02771 609 aaKnown RBP19.48■□□□□ 0.71
CAPN1-203ENST00000525013 HMBSP08397 361 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 ANP32AP39687 249 aaKnown RBP19.48■□□□□ 0.71
CAPN1-203ENST00000525013 TNFRSF4P43489 277 aa19.48■□□□□ 0.71
CAPN1-203ENST00000525013 YWHAGP61981 247 aaKnown RBP eCLIP19.48■□□□□ 0.71
CAPN1-203ENST00000525013 PREPLQ4J6C6 727 aaPredicted RBP19.48■□□□□ 0.71
CAPN1-203ENST00000525013 EMC10Q5UCC4 262 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms