RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 MGAT4CQ9UBM8 478 aa4.52□□□□□ -1.69
SKP1-212ENST00000523966 GRHPRQ9UBQ7 328 aa4.52□□□□□ -1.69
SKP1-212ENST00000523966 VPS51Q9UID3 782 aa4.52□□□□□ -1.69
SKP1-212ENST00000523966 RIMKLBQ9ULI2 386 aa4.52□□□□□ -1.69
SKP1-212ENST00000523966 NFU1Q9UMS0 254 aa4.52□□□□□ -1.69
SKP1-212ENST00000523966 OR2W5A6NFC9 320 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 HMX3A6NHT5 357 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 EFCAB8A8MWE9 144 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 AGPSO00116 658 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 AP4M1O00189 453 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 NARSO43776 548 aaKnown RBP4.51□□□□□ -1.69
SKP1-212ENST00000523966 TMPRSS11DO60235 418 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 PMPCBO75439 489 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 ACTL6BO94805 426 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 ANXA6P08133 673 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 NPSP0C0P6 89 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 EBLN1P0CF75 366 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 DHRS4L1P0CG22 281 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 ARP10275 920 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 HSD3B1P14060 373 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 DRD1P21728 446 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 TGM1P22735 817 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 RENBPP51606 427 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 AP2B1P63010 937 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 PPFIA1Q13136 1202 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 SEMA3BQ13214 749 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 BFSP2Q13515 415 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 PUM1Q14671 1186 aaKnown RBP eCLIP4.51□□□□□ -1.691e-10■■□□□ 11.7
SKP1-212ENST00000523966 RPS6KA2Q15349 733 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 C4orf46Q504U0 113 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 KIAA0895LQ68EN5 471 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 SULT6B1Q6IMI4 303 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 LDHAL6AQ6ZMR3 332 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 GRASPQ7Z6J2 395 aaPredicted RBP4.51□□□□□ -1.69
SKP1-212ENST00000523966 PEG10Q86TG7 708 aaKnown RBP4.51□□□□□ -1.69
SKP1-212ENST00000523966 VRK3Q8IV63 474 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 RSC1A1Q92681 617 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 TBC1D20Q96BZ9 403 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 RTKNQ9BST9 563 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 TMEM120AQ9BXJ8 343 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 TP63Q9H3D4 680 aaPredicted RBP4.51□□□□□ -1.69
SKP1-212ENST00000523966 SEPSECSQ9HD40 501 aaKnown RBP4.51□□□□□ -1.69
SKP1-212ENST00000523966 SAYSD1Q9NPB0 183 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 LUZP4Q9P127 313 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 AMFRQ9UKV5 643 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 DGKBQ9Y6T7 804 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 COL15A1P39059 1388 aa4.51□□□□□ -1.69
SKP1-212ENST00000523966 A8MVJ9 347 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 VWC2LB2RUY7 222 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 GCOM1H8Y6P7 765 aaPredicted RBP4.5□□□□□ -1.69
SKP1-212ENST00000523966 FZD7O75084 574 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 ERBB2P04626 1255 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 MYCLP12524 364 aaPredicted RBP4.5□□□□□ -1.69
SKP1-212ENST00000523966 ENGP17813 658 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 MMP8P22894 467 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 SEC24CP53992 1094 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 ARL4CP56559 192 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 EEFSECP57772 596 aaKnown RBP4.5□□□□□ -1.69
SKP1-212ENST00000523966 TXNL4AP83876 142 aaKnown RBP4.5□□□□□ -1.69
SKP1-212ENST00000523966 E2F1Q01094 437 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 CBFBQ13951 182 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 POSTNQ15063 836 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 ACOX1Q15067 660 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 TMEM196Q5HYL7 178 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 PCID2Q5JVF3 399 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 L1TD1Q5T7N2 865 aaKnown RBP4.5□□□□□ -1.69
SKP1-212ENST00000523966 HECTD2Q5U5R9 776 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 LAIR1Q6GTX8 287 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 ANKRD16Q6P6B7 361 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 Q6YL49 198 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 PTCHD4Q6ZW05 846 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 Q6ZWC4 215 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 RAB11FIP2Q7L804 512 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 OVCA2Q8WZ82 227 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 LINC00476Q8WZB0 136 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 RFKQ969G6 155 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 C3orf49Q96BT1 292 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 ZSCAN31Q96LW9 406 aaPredicted RBP4.5□□□□□ -1.69
SKP1-212ENST00000523966 PRRX2Q99811 253 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 TTPALQ9BTX7 342 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 CINPQ9BW66 212 aaPredicted RBP4.5□□□□□ -1.69
SKP1-212ENST00000523966 SERTAD4Q9NUC0 356 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 FBXO28Q9NVF7 368 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 KIF17Q9P2E2 1029 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 HS3ST3A1Q9Y663 406 aa4.5□□□□□ -1.69
SKP1-212ENST00000523966 WDR27A2RRH5 827 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 RHOBTB3O94955 611 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 ADRA1DP25100 572 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 CXCR5P32302 372 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 MPLP40238 635 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 PBX1P40424 430 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 AARSP49588 968 aaKnown RBP eCLIP4.49□□□□□ -1.694e-6■■■■□ 24
SKP1-212ENST00000523966 CCT8P50990 548 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 GRM4Q14833 912 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 TAF12Q16514 161 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 TMEM95Q3KNT9 176 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 TMEM63BQ5T3F8 832 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 DPY19L3Q6ZPD9 716 aa4.49□□□□□ -1.69
SKP1-212ENST00000523966 SLC29A4Q7RTT9 530 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms