RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RMDN1Q96DB5 314 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 SRRTQ9BXP5 876 aaKnown RBP19.67■□□□□ 0.74
SPIDR-220ENST00000522900 SPHK2Q9NRA0 654 aa19.67■□□□□ 0.74
SPIDR-220ENST00000522900 A0A0A0MRY4 1105 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 RNF225M0QZC1 329 aaPredicted RBP19.66■□□□□ 0.74
SPIDR-220ENST00000522900 TRIM24O15164 1050 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 CALCAP01258 141 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 CD19P15391 556 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 KDSRQ06136 332 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 PDE4CQ08493 712 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 SPEM2Q0P670 501 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 PAK1Q13153 545 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 FOXR2Q6PJQ5 311 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 CEP68Q76N32 757 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 MIB1Q86YT6 1006 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 TRIM59Q8IWR1 403 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 ETFBKMTQ8IXQ9 262 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 UBA3Q8TBC4 463 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 TFAP2BQ92481 460 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 SECISBP2LQ93073 1101 aaKnown RBP19.66■□□□□ 0.74
SPIDR-220ENST00000522900 ARHGEF4Q9NR80 690 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 KIAA1468Q9P260 1216 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 DNMT3LQ9UJW3 386 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 GMEB2Q9UKD1 530 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 TSPAN16Q9UKR8 245 aa19.66■□□□□ 0.74
SPIDR-220ENST00000522900 ATG2BQ96BY7 2078 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 CCDC163A0A0D9SF12 145 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 HOXC11O43248 304 aaPredicted RBP19.65■□□□□ 0.74
SPIDR-220ENST00000522900 VDRP11473 427 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 TBXAS1P24557 533 aaPredicted RBP19.65■□□□□ 0.74
SPIDR-220ENST00000522900 EIF2DP41214 584 aaKnown RBP19.65■□□□□ 0.74
SPIDR-220ENST00000522900 PLA2G4AP47712 749 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 TKTL1P51854 596 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 YWHAEP62258 255 aaKnown RBP19.65■□□□□ 0.74
SPIDR-220ENST00000522900 KCNH2Q12809 1159 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 ANO4Q32M45 955 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 SGO2Q562F6 1265 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 KLHDC10Q6PID8 442 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 ARHGEF19Q8IW93 802 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 FAM160A2Q8N612 972 aaPredicted RBP19.65■□□□□ 0.74
SPIDR-220ENST00000522900 GAB3Q8WWW8 586 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 ACDQ96AP0 544 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 NT5C1BQ96P26 610 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 MED15Q96RN5 788 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 ZSWIM1Q9BR11 485 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 ZDHHC4Q9NPG8 344 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 CLIC5Q9NZA1 410 aa19.65■□□□□ 0.74
SPIDR-220ENST00000522900 O00370 1275 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 AXIN1O15169 862 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 TULP3O75386 442 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 RPP40O75818 363 aaKnown RBP19.64■□□□□ 0.73
SPIDR-220ENST00000522900 STC2O76061 302 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 KLKB1P03952 638 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 APODP05090 189 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 RETP07949 1114 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 HNRNPLP14866 589 aaKnown RBP eCLIP19.64■□□□□ 0.73
SPIDR-220ENST00000522900 TIE1P35590 1138 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 GRIA2P42262 883 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 PSEN1P49768 467 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 TMEM270Q6UE05 265 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 Q6ZNB5 142 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 TPGS1Q6ZTW0 290 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 RRAGAQ7L523 313 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 BHLHA9Q7RTU4 235 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.64■□□□□ 0.73
SPIDR-220ENST00000522900 KBTBD6Q86V97 674 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 PPM1KQ8N3J5 372 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 ZNF276Q8N554 614 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 ALLCQ8N6M5 410 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 EHBP1Q8NDI1 1231 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 P2RY11Q96G91 374 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 USP18Q9UMW8 372 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 PCDHB4Q9Y5E5 795 aa19.64■□□□□ 0.73
SPIDR-220ENST00000522900 XPO1O14980 1071 aaKnown RBP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 GABBR2O75899 941 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 KLF8O95600 359 aaPredicted RBP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 APBB3O95704 486 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 ZBED1O96006 694 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 RALAP11233 206 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 KIR2DL1P43626 348 aaPredicted RBP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 BCAT1P54687 386 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 MARSP56192 900 aaKnown RBP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 YWHAGP61981 247 aaKnown RBP eCLIP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 EFEMP1Q12805 493 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 BTBD8Q5XKL5 378 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 PM20D1Q6GTS8 502 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 TMEM92Q6UXU6 159 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 TRIML1Q8N9V2 468 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 IL17RCQ8NAC3 791 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 TXNDC5Q8NBS9 432 aaKnown RBP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 CCDC26Q8TAB7 109 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 ULBP1Q9BZM6 244 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 RASAL2Q9UJF2 1139 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 LSM7Q9UK45 103 aaKnown RBP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 HCN2Q9UL51 889 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 MMP17Q9ULZ9 603 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 INVSQ9Y283 1065 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.63■□□□□ 0.73
SPIDR-220ENST00000522900 MYH10P35580 1976 aa19.63■□□□□ 0.73
SPIDR-220ENST00000522900 TBC1D3BA6NDS4 549 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms