RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	PPARGC1A	Q9UBK2	798 aa	Known RBP	10.68	□□□□□ -0.7
TCF7-223	ENST00000522653		E7ENQ6	273 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	MAN1A2	O60476	641 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	ATP6V1G2	O95670	118 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	MLN	P12872	115 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	CCR3	P51677	355 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	GRIK3	Q13003	919 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	EDRF1	Q3B7T1	1238 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	ZC3H12B	Q5HYM0	836 aa	Known RBP	10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	RGS9BP	Q6ZS82	235 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	METTL16	Q86W50	562 aa	Known RBP	10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	MYO1H	Q8N1T3	1032 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	DNAJB3	Q8WWF6	145 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	ZNF668	Q96K58	619 aa	Predicted RBP	10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	CCSER1	Q9C0I3	900 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	SLC32A1	Q9H598	525 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	ANKZF1	Q9H8Y5	726 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	GTSE1	Q9NYZ3	720 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	NDUFA13	Q9P0J0	144 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	TRMT6	Q9UJA5	497 aa	Known RBP	10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	PIPSL	A2A3N6	862 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	CYP2A7	P20853	494 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	XKR4	Q5GH76	650 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	OLFML2B	Q68BL8	750 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	TBC1D10C	Q8IV04	446 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	TAB3	Q8N5C8	712 aa	Predicted RBP	10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	DAGLB	Q8NCG7	672 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	MAGEB10	Q96LZ2	347 aa	Predicted RBP	10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	RMDN2	Q96LZ7	410 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	TBC1D13	Q9NVG8	400 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	MPP6	Q9NZW5	540 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	PCDHB2	Q9Y5E7	798 aa		10.68	□□□□□ -0.7
TCF7-223	ENST00000522653	WDR91	A4D1P6	747 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	MAP2K7	O14733	419 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	GUCA1C	O95843	209 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	EPB42	P16452	691 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CCR1	P32246	355 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	DUSP3	P51452	185 aa	Predicted RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	ARFIP2	P53365	341 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	DHX34	Q14147	1143 aa	Known RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	LRRC14	Q15048	493 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	USP45	Q70EL2	814 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	MB21D2	Q8IYB1	491 aa	Predicted RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	UBE2E3	Q969T4	207 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	AIFM3	Q96NN9	605 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	SETD4	Q9NVD3	440 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	H2AFY2	Q9P0M6	372 aa	Predicted RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	MAPRE3	Q9UPY8	281 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	INSRR	P14616	1297 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CES1	P23141	567 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	SERPINA4	P29622	427 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	TBX4	P57082	545 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	SNRPD1	P62314	119 aa	Known RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	BST2	Q10589	180 aa	Known RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CENPP	Q6IPU0	288 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	FOXR1	Q6PIV2	292 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	ATP11C	Q8NB49	1132 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CXorf40B	Q96DE9	158 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	NAF1	Q96HR8	494 aa	Known RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CLPB	Q9H078	707 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	OSGEPL1	Q9H4B0	414 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	TBC1D23	Q9NUY8	699 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	SOHLH2	Q9NX45	425 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	BARX2	Q9UMQ3	279 aa	Predicted RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	TSC22D4	Q9Y3Q8	395 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653		H3BMM5	538 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	DUSP11	O75319	330 aa	Known RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	GSN	P06396	782 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CRYBB1	P53674	252 aa	Predicted RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	GFPT1	Q06210	699 aa	Predicted RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	STAT4	Q14765	748 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	HECTD3	Q5T447	861 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CATSPER1	Q8NEC5	780 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	REXO5	Q96IC2	774 aa	Known RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	JMJD4	Q9H9V9	463 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	RHBDL2	Q9NX52	303 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CD274	Q9NZQ7	290 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	PAK5	Q9P286	719 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	SPTLC1	O15269	473 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CLTB	P09497	229 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	BLK	P51451	505 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	EFEMP1	Q12805	493 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	MYBPC2	Q14324	1141 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	DCLRE1A	Q6PJP8	1040 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	HJURP	Q8NCD3	748 aa	Predicted RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	HELQ	Q8TDG4	1101 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	PTPRN2	Q92932	1015 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	PLEKHA8	Q96JA3	519 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	KCNS3	Q9BQ31	491 aa		10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	CELF4	Q9BZC1	486 aa	Known RBP	10.67	□□□□□ -0.7
TCF7-223	ENST00000522653	LRRC14B	A6NHZ5	514 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	CCDC22	O60826	627 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	RPL21	P46778	160 aa	Known RBP	10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	PDK2	Q15119	407 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	KDELC2	Q7Z4H8	507 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	SPATA17	Q96L03	361 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	BCO2	Q9BYV7	579 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	PALMD	Q9NP74	551 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	IL1RAPL1	Q9NZN1	696 aa		10.66	□□□□□ -0.7
TCF7-223	ENST00000522653	KIF17	Q9P2E2	1029 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms