RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 FOXN3O00409 490 aaPredicted RBP18.76■□□□□ 0.59
CLK4-211ENST00000522556 THAP12O43422 761 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 ZBED1O96006 694 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 GNA15P30679 374 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 COPB1P53618 953 aaKnown RBP18.76■□□□□ 0.59
CLK4-211ENST00000522556 YWHAGP61981 247 aaKnown RBP eCLIP18.76■□□□□ 0.59
CLK4-211ENST00000522556 MESP2Q0VG99 397 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 KLHL40Q2TBA0 621 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 KLHDC7AQ5VTJ3 777 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 PM20D1Q6GTS8 502 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 FSTL4Q6MZW2 842 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 PKN3Q6P5Z2 889 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 ENOSF1Q7L5Y1 443 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 C12orf40Q86WS4 652 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 MIB1Q86YT6 1006 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 DHX40Q8IX18 779 aaKnown RBP18.76■□□□□ 0.59
CLK4-211ENST00000522556 ZNF606Q8WXB4 792 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 KCTD13Q8WZ19 329 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 GANQ9H2C0 597 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 LMAN1LQ9HAT1 526 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 C2orf42Q9NWW7 574 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 RASAL2Q9UJF2 1139 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 CLCN1P35523 988 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 GPD2P43304 727 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 MLLT6P55198 1093 aaPredicted RBP18.75■□□□□ 0.59
CLK4-211ENST00000522556 SLC8A3P57103 927 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 DAOAP59103 153 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 EFEMP1Q12805 493 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 MTAPQ13126 283 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 RAPGEF1Q13905 1077 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 DRAP1Q14919 205 aaPredicted RBP18.75■□□□□ 0.59
CLK4-211ENST00000522556 SLC47A2Q86VL8 602 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 PASD1Q8IV76 773 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 SFTPA1Q8IWL2 248 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 CPA6Q8N4T0 437 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 EDEM1Q92611 657 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 ATP2A3Q93084 1043 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 P2RY11Q96G91 374 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 NAA15Q9BXJ9 866 aaKnown RBP18.75■□□□□ 0.59
CLK4-211ENST00000522556 KCNH6Q9H252 994 aa18.75■□□□□ 0.59
CLK4-211ENST00000522556 MRPS17Q9Y2R5 130 aaKnown RBP18.75■□□□□ 0.59
CLK4-211ENST00000522556 EGFP01133 1207 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 HMBSP08397 361 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 ATP5C1P36542 298 aaKnown RBP18.74■□□□□ 0.59
CLK4-211ENST00000522556 OPRD1P41143 372 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 PTPN5P54829 565 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 CCINQ13939 588 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 DHCR24Q15392 516 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 TSSK4Q6SA08 328 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 SIX6OS1Q8N1H7 587 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 MSANTD3Q96H12 275 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 MIS12Q9H081 205 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 CHRDQ9H2X0 955 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 PLCB1Q9NQ66 1216 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 POLR3BQ9NW08 1133 aaPredicted RBP18.74■□□□□ 0.59
CLK4-211ENST00000522556 SPATA6Q9NWH7 488 aaPredicted RBP18.74■□□□□ 0.59
CLK4-211ENST00000522556 CLIC5Q9NZA1 410 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 LIMA1Q9UHB6 759 aaKnown RBP18.74■□□□□ 0.59
CLK4-211ENST00000522556 SIK3Q9Y2K2 1263 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 SH3BP1Q9Y3L3 701 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 CACNA1HO95180 2353 aa18.74■□□□□ 0.59
CLK4-211ENST00000522556 E2F8A0AVK6 867 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 STC2O76061 302 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 NFATC1O95644 943 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 KLKB1P03952 638 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 UCHL3P15374 230 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 PLA2G5P39877 138 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 RPS9P46781 194 aaKnown RBP18.73■□□□□ 0.59
CLK4-211ENST00000522556 GALK1P51570 392 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 STILQ15468 1287 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 TMEM196Q5HYL7 178 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 LY6G5CQ5SRR4 150 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 RHBDF2Q6PJF5 856 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 DDX42Q86XP3 938 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLK4-211ENST00000522556 C1orf210Q8IVY1 113 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 FAM71AQ8IYT1 594 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 ADGRG2Q8IZP9 1017 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 WDTC1Q8N5D0 677 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 PIWIL1Q96J94 861 aaKnown RBP18.73■□□□□ 0.59
CLK4-211ENST00000522556 NELL2Q99435 816 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 DNMT3LQ9UJW3 386 aa18.73■□□□□ 0.59
CLK4-211ENST00000522556 ARIH1Q9Y4X5 557 aaPredicted RBP18.73■□□□□ 0.59
CLK4-211ENST00000522556 LGALS16A8MUM7 142 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 TRDMT1O14717 391 aaKnown RBP18.72■□□□□ 0.59
CLK4-211ENST00000522556 MSI1O43347 362 aaKnown RBP18.72■□□□□ 0.59
CLK4-211ENST00000522556 RALAP11233 206 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 SLC6A11P48066 632 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 PSEN1P49768 467 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 NUBP1P53384 320 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 BSPRYQ5W0U4 402 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 KLHDC10Q6PID8 442 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 Q6ZNB5 142 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 CNGB3Q9NQW8 809 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 ST7Q9NRC1 585 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 FAM207AQ9NSI2 230 aaPredicted RBP18.72■□□□□ 0.59
CLK4-211ENST00000522556 MARCH2Q9P0N8 246 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 SFMBT1Q9UHJ3 866 aa18.72■□□□□ 0.59
CLK4-211ENST00000522556 FANCMQ8IYD8 2048 aa18.71■□□□□ 0.59
CLK4-211ENST00000522556 E5RJQ4 531 aa18.71■□□□□ 0.59
CLK4-211ENST00000522556 F8VZ95 297 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms