RNA–Protein interactions for RNA: ENST00000521434.5

MRPS28-207, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5 BASIC

Gene MRPS28, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-207ENST00000521434 RBP5P82980 135 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 CYP27A1Q02318 531 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 DHX8Q14562 1220 aaKnown RBP9.45□□□□□ -0.9
MRPS28-207ENST00000521434 TSR1Q2NL82 804 aaKnown RBP9.45□□□□□ -0.9
MRPS28-207ENST00000521434 ANO4Q32M45 955 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 TDRD10Q5VZ19 366 aaKnown RBP9.45□□□□□ -0.9
MRPS28-207ENST00000521434 GRAMD4Q6IC98 578 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 KIAA1324Q6UXG2 1013 aaKnown RBP9.45□□□□□ -0.9
MRPS28-207ENST00000521434 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 BRSK2Q8IWQ3 736 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 ZCCHC9Q8N567 271 aaKnown RBP9.45□□□□□ -0.9
MRPS28-207ENST00000521434 CADM4Q8NFZ8 388 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 CXorf38Q8TB03 319 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 RHBDD1Q8TEB9 315 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 ERLEC1Q96DZ1 483 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 DUSP9Q99956 384 aaKnown RBP9.45□□□□□ -0.9
MRPS28-207ENST00000521434 FAM213AQ9BRX8 229 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 MIR1-1HGQ9H1L0 117 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 SLC6A17Q9H1V8 727 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 ST6GALNAC4Q9H4F1 302 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 CRTAC1Q9NQ79 661 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 SPHK2Q9NRA0 654 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 SH3BP1Q9Y3L3 701 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 RAI2Q9Y5P3 530 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 PIEZO2Q9H5I5 2752 aa9.45□□□□□ -0.9
MRPS28-207ENST00000521434 CKAP5Q14008 2032 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 COL12A1Q99715 3063 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 VWA3AA6NCI4 1184 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 TRIM24O15164 1050 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 COCHO43405 550 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 SLC26A4O43511 780 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 TNFSF14O43557 240 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 NCAM1P13591 858 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 LMO2P25791 158 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 ITPKBP27987 946 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 HMGN5P82970 282 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 BNC1Q01954 994 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 SUZ12Q15022 739 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 SMAD1Q15797 465 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 PTPRNQ16849 979 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 HLA-BQ31612 363 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 SCARA3Q6AZY7 606 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 LIMS2Q7Z4I7 341 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 METTL3Q86U44 580 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 TMEM25Q86YD3 366 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 CCDC83Q8IWF9 413 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 BBS7Q8IWZ6 715 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 ZNF843Q8N446 348 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 FAM184AQ8NB25 1140 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 MYCBPAPQ8TBZ2 947 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 SCFD1Q8WVM8 642 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 KBTBD7Q8WVZ9 684 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 TOE1Q96GM8 510 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 PCED1BQ96HM7 432 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 ZFRQ96KR1 1074 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 C8orf48Q96LL4 319 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 GPR174Q9BXC1 333 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 IKZF4Q9H2S9 585 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 PRORYQ9H606 182 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 DNAJC17Q9NVM6 304 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 WSB2Q9NYS7 404 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 SIX4Q9UIU6 781 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 R3HCC1Q9Y3T6 440 aaKnown RBP9.44□□□□□ -0.9
MRPS28-207ENST00000521434 RAD54BQ9Y620 910 aa9.44□□□□□ -0.9
MRPS28-207ENST00000521434 CYSRT1A8MQ03 144 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 PRRT4C9JH25 899 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 GFRA2O00451 464 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 CAPN9O14815 690 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 CACNG3O60359 315 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 PDGFRBP09619 1106 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 HLA-EP13747 358 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 IFRD2Q12894 506 aaPredicted RBP9.43□□□□□ -0.9
MRPS28-207ENST00000521434 MYO1EQ12965 1108 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 ARL6IP4Q66PJ3 421 aaKnown RBP9.43□□□□□ -0.9
MRPS28-207ENST00000521434 LRRC69Q6ZNQ3 347 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 ZNF720Q7Z2F6 126 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 PDZD8Q8NEN9 1154 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 OVCA2Q8WZ82 227 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 HVCN1Q96D96 273 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 NXPE2Q96DL1 559 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 CALML4Q96GE6 196 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 XPO6Q96QU8 1125 aaKnown RBP9.43□□□□□ -0.9
MRPS28-207ENST00000521434 MTMR12Q9C0I1 747 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 ITM2CQ9NQX7 267 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 BLOC1S4Q9NUP1 217 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 RBAKQ9NYW8 714 aaPredicted RBP9.43□□□□□ -0.9
MRPS28-207ENST00000521434 USP36Q9P275 1121 aaKnown RBP9.43□□□□□ -0.9
MRPS28-207ENST00000521434 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.43□□□□□ -0.9
MRPS28-207ENST00000521434 LIMCH1Q9UPQ0 1083 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 BTBD3Q9Y2F9 522 aa9.43□□□□□ -0.9
MRPS28-207ENST00000521434 PTPN13Q12923 2485 aa9.42□□□□□ -0.9
MRPS28-207ENST00000521434 A0A1B0GVT2 93 aa9.42□□□□□ -0.9
MRPS28-207ENST00000521434 METTL12A8MUP2 240 aa9.42□□□□□ -0.9
MRPS28-207ENST00000521434 NEDD8-MDP1E9PL57 170 aa9.42□□□□□ -0.9
MRPS28-207ENST00000521434 J3QKU1 62 aa9.42□□□□□ -0.9
MRPS28-207ENST00000521434 RTN3O95197 1032 aaPredicted RBP9.42□□□□□ -0.9
MRPS28-207ENST00000521434 LDHAP00338 332 aaKnown RBP9.42□□□□□ -0.9
MRPS28-207ENST00000521434 TMEM191BP0C7N4 346 aa9.42□□□□□ -0.9
MRPS28-207ENST00000521434 TYRP14679 529 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms