RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 METTL14Q9HCE5 456 aaKnown RBP11.32□□□□□ -0.6
PVT1-209ENST00000520913 ARHGEF4Q9NR80 690 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 SPHK2Q9NRA0 654 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 SEMA4GQ9NTN9 838 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 EBF1Q9UH73 591 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 COQ4Q9Y3A0 265 aa11.32□□□□□ -0.6
PVT1-209ENST00000520913 A0A1W2PQH9 124 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 EPN2O95208 641 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 RARGP13631 454 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 GRIA2P42262 883 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 PGFP49763 221 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 DGKEP52429 567 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 SLC8A3P57103 927 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 CUL2Q13617 745 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 CSRP2Q16527 193 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 C2orf27AQ580R0 203 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 ARHGAP17Q68EM7 881 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 KLHDC10Q6PID8 442 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 PRR23CQ6ZRP0 262 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 ETFBKMTQ8IXQ9 262 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 SLC35C1Q96A29 364 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 DHTKD1Q96HY7 919 aaPredicted RBP11.31□□□□□ -0.6
PVT1-209ENST00000520913 HEXIM2Q96MH2 286 aaKnown RBP11.31□□□□□ -0.6
PVT1-209ENST00000520913 CEP63Q96MT8 703 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 KLF16Q9BXK1 252 aaPredicted RBP11.31□□□□□ -0.6
PVT1-209ENST00000520913 NMUR1Q9HB89 426 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.31□□□□□ -0.63e-6■■■■□ 22.1
PVT1-209ENST00000520913 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
PVT1-209ENST00000520913 OSER1Q9NX31 292 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 NAGPAQ9UK23 515 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 MAN1B1Q9UKM7 699 aa11.31□□□□□ -0.6
PVT1-209ENST00000520913 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.31□□□□□ -0.6
PVT1-209ENST00000520913 MUC22E2RYF6 1773 aaPredicted RBP11.31□□□□□ -0.6
PVT1-209ENST00000520913 CKAP5Q14008 2032 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 TBX18O95935 607 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 RALAP11233 206 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 TBXAS1P24557 533 aaPredicted RBP11.3□□□□□ -0.6
PVT1-209ENST00000520913 SLC6A11P48066 632 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 BCAT1P54687 386 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 RAD23BP54727 409 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 ELF2Q15723 593 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 ANO4Q32M45 955 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 CCDC40Q4G0X9 1142 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 C10orf120Q5SQS8 335 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 FOXR2Q6PJQ5 311 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 NUDT18Q6ZVK8 323 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 HTR3DQ70Z44 454 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 TRMT11Q7Z4G4 463 aaKnown RBP11.3□□□□□ -0.6
PVT1-209ENST00000520913 KBTBD6Q86V97 674 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 C11orf74Q86VG3 221 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 RASSF3Q86WH2 238 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 ARHGAP18Q8N392 663 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 ZNF276Q8N554 614 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 TERB1Q8NA31 727 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 NETO1Q8TDF5 533 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 TATDN2Q93075 761 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 WBP2Q969T9 261 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 ZC3H10Q96K80 434 aaKnown RBP11.3□□□□□ -0.6
PVT1-209ENST00000520913 CNOT6LQ96LI5 555 aaKnown RBP11.3□□□□□ -0.6
PVT1-209ENST00000520913 RTKNQ9BST9 563 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 TPSD1Q9BZJ3 242 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 CLIC5Q9NZA1 410 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 DEC1Q9P2X7 70 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 DNMT3LQ9UJW3 386 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
PVT1-209ENST00000520913 PCDHGA5Q9Y5G8 931 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 USP3Q9Y6I4 520 aa11.3□□□□□ -0.6
PVT1-209ENST00000520913 BICDL2A1A5D9 508 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 NEDD8-MDP1E9PL57 170 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 MDM4O15151 490 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 CACNG3O60359 315 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 GREM1O60565 184 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 TULP3O75386 442 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 ALDH1A2O94788 518 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 KLF8O95600 359 aaPredicted RBP11.29□□□□□ -0.6
PVT1-209ENST00000520913 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
PVT1-209ENST00000520913 TIE1P35590 1138 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 TNFRSF4P43489 277 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 KIR2DL1P43626 348 aaPredicted RBP11.29□□□□□ -0.6
PVT1-209ENST00000520913 FMO5P49326 533 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 MESP2Q0VG99 397 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 BST2Q10589 180 aaKnown RBP11.29□□□□□ -0.6
PVT1-209ENST00000520913 CRY1Q16526 586 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 GOLGA7BQ2TAP0 167 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 PLK5Q496M5 336 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 SGO2Q562F6 1265 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 RAB41Q5JT25 222 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 EOGTQ5NDL2 527 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 ISM2Q6H9L7 571 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 ANO7Q6IWH7 933 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 PIGZQ86VD9 579 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 TTC30AQ86WT1 665 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 SFTPA1Q8IWL2 248 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 ALLCQ8N6M5 410 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 C12orf50Q8NA57 414 aaPredicted RBP11.29□□□□□ -0.6
PVT1-209ENST00000520913 IL17RCQ8NAC3 791 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 ANKRD52Q8NB46 1076 aa11.29□□□□□ -0.6
PVT1-209ENST00000520913 TXNDC5Q8NBS9 432 aaKnown RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms