RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, human

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB13-208	ENST00000520776	PRKCB	P05771	671 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	POLB	P06746	335 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	JUP	P14923	745 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PPP3CB	P16298	524 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	MAK	P20794	623 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CNTF	P26441	200 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ATXN1	P54253	815 aa	Known RBP	4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	MTAP	Q13126	283 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ACOX1	Q15067	660 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SLC4A8	Q2Y0W8	1093 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	INTS11	Q5TA45	600 aa	Known RBP	4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	ARMC6	Q6NXE6	501 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	RRAGA	Q7L523	313 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TMTC1	Q8IUR5	882 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	C11orf44	Q8N8P7	122 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	OR6Y1	Q8NGX8	325 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	THAP4	Q8WY91	577 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	HERVK_113	Q902F9	699 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	LPIN2	Q92539	896 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	SDCCAG3	Q96C92	435 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	PPM1M	Q96MI6	270 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TRAPPC9	Q96Q05	1148 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	VN1R3	Q9BXE9	311 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TPSD1	Q9BZJ3	242 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	INO80B	Q9C086	356 aa	Predicted RBP	4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	VPS45	Q9NRW7	570 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	DRG1	Q9Y295	367 aa	Known RBP	4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	CRYL1	Q9Y2S2	319 aa		4.09	□□□□□ -1.75
EFCAB13-208	ENST00000520776	TRGV11	A0A075B6L2	103 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	SNX2	O60749	519 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ADH4	P08319	380 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	DDX6	P26196	483 aa	Known RBP eCLIP	4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	RBL1	P28749	1068 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	SEC24C	P53992	1094 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	INHBC	P55103	352 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	TBX2	Q13207	712 aa	Predicted RBP	4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	SIM2	Q14190	667 aa	Predicted RBP	4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	MAPRE1	Q15691	268 aa	Known RBP	4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	BTBD16	Q32M84	506 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ADCK5	Q3MIX3	580 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	AFG1L	Q8WV93	481 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	MAEL	Q96JY0	434 aa	Known RBP	4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	PRRX2	Q99811	253 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	PYM1	Q9BRP8	204 aa	Known RBP	4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	IFT80	Q9P2H3	777 aa	Predicted RBP	4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	CNTN6	Q9UQ52	1028 aa		4.09	□□□□□ -1.76
EFCAB13-208	ENST00000520776	SPDEF	O95238	335 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	C1S	P09871	688 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ZEB1	P37275	1124 aa	Predicted RBP	4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	CLCA4	Q14CN2	919 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	TTC22	Q5TAA0	569 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	MSANTD2	Q6P1R3	559 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	NFRKB	Q6P4R8	1299 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	MAVS	Q7Z434	540 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	GPR149	Q86SP6	731 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	LRRTM4	Q86VH4	590 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ZNF276	Q8N554	614 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	NAXE	Q8NCW5	288 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	WDR60	Q8WVS4	1066 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	GLG1	Q92896	1179 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	MYEOV	Q96EZ4	313 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	MCRS1	Q96EZ8	462 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ZCWPW1	Q9H0M4	648 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776	LMTK3	Q96Q04	1460 aa		4.08	□□□□□ -1.76
EFCAB13-208	ENST00000520776		A1L4Q6	167 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	UNC119B	A6NIH7	251 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776		J3KRW8	73 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	EXOC5	O00471	708 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	PPP6R2	O75170	966 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	RPP40	O75818	363 aa	Known RBP	4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	CER1	O95813	267 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	TK1	P04183	234 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	YY1	P25490	414 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	AKT1	P31749	480 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	PBX1	P40424	430 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	AARS	P49588	968 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	TUB	P50607	506 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	CDK7	P50613	346 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	TP53BP2	Q13625	1128 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	SF3B3	Q15393	1217 aa	Known RBP	4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ANKRD45	Q5TZF3	282 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	PIK3AP1	Q6ZUJ8	805 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	RAB11FIP2	Q7L804	512 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	C2CD5	Q86YS7	1000 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	LNX2	Q8N448	690 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	FSTL5	Q8N475	847 aa	Predicted RBP	4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	CTHRC1	Q96CG8	243 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	SEPSECS	Q9HD40	501 aa	Known RBP	4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	VWC2L	B2RUY7	222 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	LPXN	O60711	386 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	WDR47	O94967	919 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	LAG3	P18627	525 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	DDIT3	P35638	169 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ACTR2	P61160	394 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	CSHL1	Q14406	222 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	TMEM196	Q5HYL7	178 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	VWA1	Q6PCB0	445 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	ANKS1B	Q7Z6G8	1248 aa		4.07	□□□□□ -1.76
EFCAB13-208	ENST00000520776	TRABD2A	Q86V40	505 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms