RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 C12orf56Q8IXR9 622 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 ARL14EPQ8N8R7 260 aaPredicted RBP9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 XXYLT1Q8NBI6 393 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 MYCBPAPQ8TBZ2 947 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 CCDC127Q96BQ5 260 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 PCED1BQ96HM7 432 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 CEP295NLQ96MC4 621 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 CGRRF1Q99675 332 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 ECT2Q9H8V3 914 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 BRD7Q9NPI1 651 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 IGSF5Q9NSI5 407 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 RCOR1Q9UKL0 485 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 RAB23Q9ULC3 237 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 NCOR2Q9Y618 2525 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 ZNF292O60281 2723 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 SCN1AP35498 2009 aa9.89□□□□□ -0.83
CTNNA1-221ENST00000520339 C2orf78A6NCI8 922 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 EGFP01133 1207 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 TCF3P15923 654 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 PFKLP17858 780 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 HDCP19113 662 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 TNNI1P19237 187 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 SDHBP21912 280 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 GJA4P35212 333 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 ATXN1P54253 815 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 AMPD2Q01433 879 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 PSMD2Q13200 908 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 CUL4BQ13620 913 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 PKP1Q13835 747 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 KNOP1Q1ED39 458 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 NAIF1Q69YI7 327 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 XKR5Q6UX68 686 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 PRR23BQ6ZRT6 265 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 HS2ST1Q7LGA3 356 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 PLEKHO2Q8TD55 490 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 SH3RF2Q8TEC5 729 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 OSCP1Q8WVF1 389 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 C8orf48Q96LL4 319 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 FNBP1Q96RU3 617 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 MMS19Q96T76 1030 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 TTLL2Q9BWV7 592 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 ZCCHC2Q9C0B9 1178 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 XYLT2Q9H1B5 865 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 TRPC7Q9HCX4 862 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 SLC39A2Q9NP94 309 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 DUS2Q9NX74 493 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 CGNQ9P2M7 1197 aaKnown RBP9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 FOXD3Q9UJU5 478 aaPredicted RBP9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 USP18Q9UMW8 372 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 ARHGAP26Q9UNA1 814 aa9.88□□□□□ -0.83
CTNNA1-221ENST00000520339 CCDC163A0A0D9SF12 145 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 ZNF840PA6NDX5 716 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 KLRC4O43908 158 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 LRP3O75074 770 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 CPNE3O75131 537 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 ATG13O75143 517 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 TNFRSF21O75509 655 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 CKMP06732 381 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 SLFN14P0C7P3 912 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 PTPN1P18031 435 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 DRD1P21728 446 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 GRNP28799 593 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 ATICP31939 592 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 GRIK1P39086 918 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 AFMP43652 599 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 ME1P48163 572 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 MYL6P60660 151 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 ZXDBP98169 803 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 CYP27A1Q02318 531 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 PTSQ03393 145 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 SPEM2Q0P670 501 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 WDR72Q3MJ13 1102 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 MDH1BQ5I0G3 518 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 DENND5BQ6ZUT9 1274 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 GRAMD1CQ8IYS0 662 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 FSIP1Q8NA03 581 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 OR6B3Q8NGW1 331 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 TMEM174Q8WUU8 243 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 EZH1Q92800 747 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 P2RY13Q9BPV8 354 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 LINC00597Q9H2U6 94 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 SNX25Q9H3E2 840 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 TMEM30AQ9NV96 361 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 POLR3BQ9NW08 1133 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 DMAC2Q9NW81 257 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 TRPM5Q9NZQ8 1165 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 CFAP45Q9UL16 551 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 WNT6Q9Y6F9 365 aa9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 PDCD11Q14690 1871 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-221ENST00000520339 F8VP50 259 aa9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 CLDN5O00501 218 aa9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 EXOC3O60645 756 aa9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 RECKO95980 971 aa9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 C4BPAP04003 597 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 COL4A2P08572 1712 aa9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 PPP3CCP48454 512 aa9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 IFNAR2P48551 515 aa9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 PXNP49023 591 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-221ENST00000520339 CASP4P49662 377 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms