RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 CD8B2A6NJW9 211 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 ERVV-2B6SEH9 535 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 IPO8O15397 1037 aaKnown RBP2.3□□□□□ -2.04
CCNC-208ENST00000519617 USP1O94782 785 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 ABLIM3O94929 683 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 ALPLP05186 524 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 HOXB7P09629 217 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 FTH1P19P0C7X4 201 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SCP2P22307 547 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SMARCA1P28370 1054 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 PRDX5P30044 214 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 PPIFP30405 207 aaKnown RBP2.3□□□□□ -2.04
CCNC-208ENST00000519617 PIK3CGP48736 1102 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 CLCN2P51788 898 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 PDE1AP54750 535 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 NANOS2P60321 138 aaKnown RBP2.3□□□□□ -2.04
CCNC-208ENST00000519617 SP2Q02086 613 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SRSF1Q07955 248 aaKnown RBP eCLIP2.3□□□□□ -2.04
CCNC-208ENST00000519617 ERV3-1Q14264 604 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 TRIM71Q2Q1W2 868 aaKnown RBP2.3□□□□□ -2.04
CCNC-208ENST00000519617 CERKLQ49MI3 558 aaPredicted RBP2.3□□□□□ -2.04
CCNC-208ENST00000519617 C10orf25Q5T742 122 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 FAM160B1Q5W0V3 765 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 ZNF530Q6P9A1 599 aaPredicted RBP2.3□□□□□ -2.04
CCNC-208ENST00000519617 KIRREL2Q6UWL6 708 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 Q6ZWC4 215 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 USP37Q86T82 979 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 FAM90A1Q86YD7 464 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 KRT78Q8N1N4 520 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 LRRC71Q8N4P6 559 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SNX18Q96RF0 628 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 STK31Q9BXU1 1019 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 VPS33BQ9H267 617 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 TMOD3Q9NYL9 352 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 USP35Q9P2H5 1018 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 KLHL13Q9P2N7 655 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SSX2IPQ9Y2D8 614 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 IL16Q14005 1332 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SPATA31A1Q5TZJ5 1347 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SPATA31A5Q5VU36 1347 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 SPATA31A7Q8IWB4 1347 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 KDRP35968 1356 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 MAP3K5Q99683 1374 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 COL5A2P05997 1499 aaPredicted RBP2.3□□□□□ -2.04
CCNC-208ENST00000519617 NFAT5O94916 1531 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 KAT6BQ8WYB5 2073 aa2.3□□□□□ -2.04
CCNC-208ENST00000519617 LTN1O94822 1766 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 SLIT2O94813 1529 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 ZBED9Q6R2W3 1325 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 A1L4Q6 167 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 KLHL33A6NCF5 533 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 FAM90A8PA6NJQ4 464 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 UBE2Q2LH0YL09 131 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 APAF1O14727 1248 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 DSCR3O14972 297 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 ERC2O15083 957 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 STARD3NLO95772 234 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 DDX58O95786 925 aaKnown RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 A1BGP04217 495 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 FESP07332 822 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 HMOX1P09601 288 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 FAM90A13PP0C7W8 464 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 FAM90A24PP0C7X0 464 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 TMPOP42166 694 aaKnown RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 KCNJ5P48544 419 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 TAF7Q15545 349 aaPredicted RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 PGM2L1Q6PCE3 622 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 KRT27Q7Z3Y8 459 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 KRT26Q7Z3Y9 468 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 PIP4P1Q86T03 277 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 CBARPQ8N350 705 aaPredicted RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 RBMXL3Q8N7X1 1067 aaKnown RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 TERB1Q8NA31 727 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 ACRBPQ8NEB7 543 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 C1orf162Q8NEQ5 155 aaPredicted RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 ABHD11Q8NFV4 315 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 ZNF398Q8TD17 642 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 PTDSS2Q9BVG9 487 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 C1orf43Q9BWL3 253 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 SLKQ9H2G2 1235 aaPredicted RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 HESX1Q9UBX0 185 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 TSPYL4Q9UJ04 414 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 SERTAD3Q9UJW9 196 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 ZDHHC8Q9ULC8 765 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 GABRQQ9UN88 632 aa2.29□□□□□ -2.04
CCNC-208ENST00000519617 LAS1LQ9Y4W2 734 aaKnown RBP2.29□□□□□ -2.04
CCNC-208ENST00000519617 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 PARP4Q9UKK3 1724 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 MARF1Q9Y4F3 1742 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 BCL9O00512 1426 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 ATRNO75882 1429 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 TCRBV5S1A1TA0A578 114 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 CYSRT1A8MQ03 144 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 DCLK1O15075 740 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 SMAD6O43541 496 aaKnown RBP2.28□□□□□ -2.04
CCNC-208ENST00000519617 PCDHGA12O60330 932 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 EXOC3O60645 756 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 ARIH2O95376 493 aa2.28□□□□□ -2.04
CCNC-208ENST00000519617 VIL1P09327 827 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms