RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 OVCA2Q8WZ82 227 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 IGSF8Q969P0 613 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 C8orf48Q96LL4 319 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 KCNK17Q96T54 332 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 NUP58Q9BVL2 599 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 OSGEPQ9NPF4 335 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 WDR35Q9P2L0 1181 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 HCN2Q9UL51 889 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 AGAP1Q9UPQ3 857 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 BTBD3Q9Y2F9 522 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 R3HCC1Q9Y3T6 440 aaKnown RBP10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 STYXL1Q9Y6J8 313 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 SPTA1P02549 2419 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 KNTC1P50748 2209 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 MYOFQ9NZM1 2061 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 PAPSS1O43252 624 aaPredicted RBP10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 TRAK2O60296 914 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 CACNG3O60359 315 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 WISP1O95388 367 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 IGLV3-19P01714 112 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 NTRK1P04629 796 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 ITGB3P05106 788 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 PLA2G4BP0C869 781 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 BDNFP23560 247 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 FOSBP53539 338 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 USP46P62068 366 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 CXADRP78310 365 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 GTF2BQ00403 316 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 BNC1Q01954 994 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 ORC1Q13415 861 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 CCDC157Q569K6 752 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 SLC39A4Q6P5W5 647 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 CENPQQ7L2Z9 268 aaPredicted RBP10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 MYCT1Q8N699 235 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 ZNF454Q8N9F8 522 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 C1orf216Q8TAB5 229 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 TMEM176AQ96HP8 235 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 CDK5RAP3Q96JB5 506 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 ACOX2Q99424 681 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 SYT15Q9BQS2 421 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 PARVGQ9HBI0 331 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 IGSF5Q9NSI5 407 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 DNAJC17Q9NVM6 304 aaKnown RBP10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 EIF2B4Q9UI10 523 aaKnown RBP10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 ITGA11Q9UKX5 1188 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 SNX9Q9Y5X1 595 aa10.47□□□□□ -0.73
SH2D4A-202ENST00000518040 COL6A6A6NMZ7 2263 aa10.46□□□□□ -0.73
SH2D4A-202ENST00000518040 A0A1B0GVT2 93 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 SCAMP3O14828 347 aaKnown RBP10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 FAM13AO94988 1023 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 ACADMP11310 421 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 IL12RB1P42701 662 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 GRIA4P48058 902 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 TUBP50607 506 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 ZNF131P52739 623 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 RBP5P82980 135 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 TFAMQ00059 246 aaKnown RBP10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 TLE3Q04726 772 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 TAF10Q12962 218 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 MYO1EQ12965 1108 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 ZRSR1Q15695 479 aaKnown RBP10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 PKDCCQ504Y2 493 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 PCSK4Q6UW60 755 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 OSTM1Q86WC4 334 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 NECAB1Q8N987 351 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 FAM181AQ8N9Y4 354 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 MYLPFQ96A32 169 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 C8orf76Q96K31 380 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 MMTAG2Q9BU76 263 aaKnown RBP10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 CD93Q9NPY3 652 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 RAD54BQ9Y620 910 aa10.46□□□□□ -0.74
SH2D4A-202ENST00000518040 HECTD1Q9ULT8 2610 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 PP2D1A8MPX8 630 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 RFPL3O75679 317 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 RTN3O95197 1032 aaPredicted RBP10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 C6P13671 934 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 CSNK1EP49674 416 aaKnown RBP10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 TPMTP51580 245 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 CYP27A1Q02318 531 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 ME3Q16798 604 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 KIF19Q2TAC6 998 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 HECTD3Q5T447 861 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 BROXQ5VW32 411 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 TMEM25Q86YD3 366 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 BBS7Q8IWZ6 715 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 CACTIN-AS1Q8N1I8 211 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 CSGALNACT2Q8N6G5 542 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 C1orf127Q8N9H9 656 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 MYCBPAPQ8TBZ2 947 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 PRCCQ92733 491 aaPredicted RBP10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 SIPA1Q96FS4 1042 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 SLC6A17Q9H1V8 727 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 MARK1Q9P0L2 795 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 GMIPQ9P107 970 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 DNMT3LQ9UJW3 386 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 ANKRD6Q9Y2G4 727 aa10.45□□□□□ -0.74
SH2D4A-202ENST00000518040 COL5A1P20908 1838 aaPredicted RBP10.44□□□□□ -0.74
SH2D4A-202ENST00000518040 F8VP50 259 aa10.44□□□□□ -0.74
SH2D4A-202ENST00000518040 COCHO43405 550 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms