RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 PAK5Q9P286 719 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 AP4E1Q9UPM8 1137 aa11.22□□□□□ -0.61
SPIDR-204ENST00000517824 SOX1O00570 391 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 CAPN9O14815 690 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PAPSS1O43252 624 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 CDH16O75309 829 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ASGR1P07306 291 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PTPN1P18031 435 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PAX3P23760 479 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 IVDP26440 423 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 SOX4Q06945 474 aaPredicted RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 TRIM32Q13049 653 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PDIA2Q13087 525 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 TMED2Q15363 201 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 TAZQ16635 292 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 KYNUQ16719 465 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 CCDC14Q49A88 953 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PKDCCQ504Y2 493 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ANKRD20A8PQ5CZ79 823 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ERMARDQ5T6L9 678 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 EMC10Q5UCC4 262 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 WSCD1Q658N2 575 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 BZW1Q7L1Q6 419 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ANKS1BQ7Z6G8 1248 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ZC3H18Q86VM9 953 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ZBED8Q8IZ13 594 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PDIK1LQ8N165 341 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 URGCPQ8TCY9 931 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PAWRQ96IZ0 340 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 SENP8Q96LD8 212 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 C9orf72Q96LT7 481 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ZFP42Q96MM3 310 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 RNF157Q96PX1 679 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 HNRNPABQ99729 332 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 TRIM62Q9BVG3 475 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 DUSP16Q9BY84 665 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PHACTR1Q9C0D0 580 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 ZMYND15Q9H091 742 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 KLC2Q9H0B6 622 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 CXCL16Q9H2A7 254 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 EPB41L4BQ9H329 900 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 RABEP2Q9H5N1 569 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 PCDH18Q9HCL0 1135 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 INTS9Q9NV88 658 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 GPATCH2LQ9NWQ4 482 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 DDX43Q9NXZ2 648 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 DSEQ9UL01 958 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 INPP5FQ9Y2H2 1132 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 HEY1Q9Y5J3 304 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.21□□□□□ -0.61
SPIDR-204ENST00000517824 IKBKGQ9Y6K9 419 aa11.21□□□□□ -0.61
SPIDR-204ENST00000517824 MYO18AQ92614 2054 aaKnown RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 MIA3Q5JRA6 1907 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 ZNF487B1APH4 448 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 TULP2O00295 520 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 PTGESO14684 152 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 SPTLC1O15269 473 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 KCNN4O15554 427 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 AP1G2O75843 785 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 CD48P09326 243 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 ZSCAN5DPP0CG00 497 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 GHRP10912 638 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 FGFR1P11362 822 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 ETS1P14921 441 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 PECAM1P16284 738 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 CYP2F1P24903 491 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 STIP1P31948 543 aaKnown RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 MNX1P50219 401 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 SCNN1GP51170 649 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 CACNB2Q08289 660 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 GRIK3Q13003 919 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 MMRN1Q13201 1228 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 PTK7Q13308 1070 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 KCNA10Q16322 511 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 KLHL38Q2WGJ6 581 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 EFHC2Q5JST6 749 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 RNASEH2BQ5TBB1 312 aaKnown RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 ARCQ7LC44 396 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 STRADAQ7RTN6 431 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 CPLX4Q7Z7G2 160 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 NLRP14Q86W24 1093 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 OSTM1Q86WC4 334 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 RELL1Q8IUW5 271 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 THEM5Q8N1Q8 247 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 ARFGAP1Q8N6T3 406 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 FAM71DQ8N9W8 422 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 PYROXD1Q8WU10 500 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 PRCCQ92733 491 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 ARHGEF2Q92974 986 aaKnown RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 FAF2Q96CS3 445 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 SMARCD1Q96GM5 515 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 UROC1Q96N76 676 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 FRMD8Q9BZ67 464 aaPredicted RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 PRDM16Q9HAZ2 1276 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 KCNK9Q9NPC2 374 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 XPO7Q9UIA9 1087 aaKnown RBP11.2□□□□□ -0.62
SPIDR-204ENST00000517824 CDH9Q9ULB4 789 aa11.2□□□□□ -0.62
SPIDR-204ENST00000517824 TANC1Q9C0D5 1861 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms