RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 WDR53Q7Z5U6 358 aaPredicted RBP3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 SUGP1Q8IWZ8 645 aaKnown RBP3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 SYNE4Q8N205 404 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 B3GALNT2Q8NCR0 500 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 NGDNQ8NEJ9 315 aaKnown RBP3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 PPHLN1Q8NEY8 458 aaKnown RBP3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 SLC2A12Q8TD20 617 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 RUBCNQ92622 972 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 CTHRC1Q96CG8 243 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 PBKQ96KB5 322 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 COQ10AQ96MF6 247 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 TRAPPC9Q96Q05 1148 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 GPR20Q99678 358 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 TPSD1Q9BZJ3 242 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 ZNF768Q9H5H4 540 aaKnown RBP3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 JMJD4Q9H9V9 463 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 AS3MTQ9HBK9 375 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 NOD2Q9HC29 1040 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 RIC8AQ9NPQ8 531 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 FSCN3Q9NQT6 498 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 LIN7CQ9NUP9 197 aaKnown RBP3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 TMEM160Q9NX00 188 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 KCTD5Q9NXV2 234 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 EHD3Q9NZN3 535 aa3.78□□□□□ -1.8
RNU6-390P-201ENST00000516259 LOC105369274A0A096LPK9 316 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 LOC102723532A0A0G2JNH3 316 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 A1L4Q6 167 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 CCDC151A5D8V7 595 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 MBD3L5A6NJ08 208 aaPredicted RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 F5H0A9 414 aaPredicted RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 EYA2O00167 538 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 EXOC5O00471 708 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 PPM1DO15297 605 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 EPB41L2O43491 1005 aaKnown RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TMPRSS11DO60235 418 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TSPAN3O60637 253 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 USP1O94782 785 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TMEM225BP0DP42 221 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 CKMT1AP12532 417 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 PPP3CBP16298 524 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 ADORA2AP29274 412 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 GKP32189 559 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 MAN1A1P33908 653 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 FOLR3P41439 243 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 MAGEA10P43363 369 aaPredicted RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 EIF4A1P60842 406 aaKnown RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 UBE3AQ05086 875 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 CHRNDQ07001 517 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 EFEMP1Q12805 493 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 DNASE1L3Q13609 305 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 DCTN1Q14203 1278 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 ANKRD1Q15327 319 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 AASDHQ4L235 1098 aaPredicted RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TIGD2Q4W5G0 525 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 HYIQ5T013 277 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 DENND2CQ68D51 928 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 SLC9A4Q6AI14 798 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 PIK3AP1Q6ZUJ8 805 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 GPR149Q86SP6 731 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 C2CD5Q86YS7 1000 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TMTC1Q8IUR5 882 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 C1orf210Q8IVY1 113 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 OR4N4Q8N0Y3 316 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TMEM57Q8N5G2 664 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 SSH3Q8TE77 659 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 CACTINQ8WUQ7 758 aaKnown RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TMEM171Q8WVE6 324 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 ASB12Q8WXK4 309 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 HAS1Q92839 578 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 FKBP10Q96AY3 582 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 SKA1Q96BD8 255 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 PTCD3Q96EY7 689 aaKnown RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 LOXL4Q96JB6 756 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 VPS50Q96JG6 964 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 KRTAP3-1Q9BYR8 98 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 ZHX3Q9H4I2 956 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 TAF1DQ9H5J8 278 aaPredicted RBP3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 NRDE2Q9H7Z3 1164 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 PRDM16Q9HAZ2 1276 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 SMPD4Q9NXE4 827 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 PNMA2Q9UL42 364 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 CRYL1Q9Y2S2 319 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 DERAQ9Y315 318 aa3.77□□□□□ -1.81
RNU6-390P-201ENST00000516259 MAST3O60307 1309 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 ADGRA2Q96PE1 1338 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 HMX3A6NHT5 357 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 FAM90A20PA6NIJ5 464 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 NKX2-8O15522 239 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 SEPT4O43236 478 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 HNRNPRO43390 633 aaKnown RBP3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 PMPCBO75439 489 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 PYGLP06737 847 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 CYP3A4P08684 503 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 IL6RP08887 468 aaPredicted RBP3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 MYCLP12524 364 aaPredicted RBP3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 TNNT1P13805 278 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 XBP1P17861 261 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 MATN1P21941 496 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 SERPINA4P29622 427 aa3.76□□□□□ -1.81
RNU6-390P-201ENST00000516259 LIPAP38571 399 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms