RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 IRGCQ6NXR0 463 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 RNF139Q8WU17 664 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 ANKRD27Q96NW4 1050 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 NMUR2Q9GZQ4 415 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 ADAM7Q9H2U9 754 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 MAP3K20Q9NYL2 800 aaKnown RBP10.58□□□□□ -0.72
SMG7-215ENST00000515829 CORO1CQ9ULV4 474 aaPredicted RBP10.58□□□□□ -0.72
SMG7-215ENST00000515829 GSC2O15499 205 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 PROCP04070 461 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 STAG3L1P0CL83 205 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 MMP8P22894 467 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 ESRRGP62508 458 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 EN1Q05925 392 aaPredicted RBP10.58□□□□□ -0.72
SMG7-215ENST00000515829 DEUP1Q05D60 604 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 HABP4Q5JVS0 413 aaKnown RBP10.58□□□□□ -0.72
SMG7-215ENST00000515829 OLFML2BQ68BL8 750 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 LAYNQ6UX15 382 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 APOBEC3GQ9HC16 384 aaKnown RBP10.58□□□□□ -0.72
SMG7-215ENST00000515829 TSPAN16Q9UKR8 245 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 STAP1Q9ULZ2 295 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 SEC24DO94855 1032 aaPredicted RBP10.58□□□□□ -0.72
SMG7-215ENST00000515829 RALBP11234 206 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 HSD17B4P51659 736 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 GDF10P55107 478 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 PRAMEP78395 509 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 TTLL4Q14679 1199 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 RNF220Q5VTB9 566 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 TXNRD3NBQ6F5E7 133 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 TFB1MQ8WVM0 346 aaKnown RBP10.58□□□□□ -0.72
SMG7-215ENST00000515829 CPT1BQ92523 772 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 PORCNQ9H237 461 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 CCDC134Q9H6E4 229 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 RIPK3Q9Y572 518 aa10.58□□□□□ -0.72
SMG7-215ENST00000515829 E5RJQ4 531 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 PRPF4O43172 522 aaKnown RBP eCLIP10.57□□□□□ -0.728e-8■■■□□ 19
SMG7-215ENST00000515829 LGR5O75473 907 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 IL18RAPO95256 599 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 DPEP1P16444 411 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 EEF1B2P24534 225 aaKnown RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 AVPR1AP37288 418 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 IYDQ6PHW0 289 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 MRIQ9BWK5 157 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 MYPNQ86TC9 1320 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 ZNF862O60290 1169 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 APOEP02649 317 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 VDRP11473 427 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 CYP2F1P24903 491 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 NFKBIAP25963 317 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 SLC1A6P48664 564 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 NDST1P52848 882 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 FLOT2Q14254 428 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 PDCD2Q16342 344 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 LRRC38Q5VT99 294 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 FAM228AQ86W67 206 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 STKLD1Q8NE28 680 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 EME1Q96AY2 570 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 ZNF570Q96NI8 536 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 SOX13Q9UN79 622 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 ARHGAP26Q9UNA1 814 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 DTNAQ9Y4J8 743 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 TRPM3Q9HCF6 1732 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 SIGLEC16A6NMB1 481 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 GLRA3O75311 464 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 C4BPAP04003 597 aaKnown RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 GJB1P08034 283 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 SPRP35270 261 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 PPARGP37231 505 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 MMP14P50281 582 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 GAD2Q05329 585 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 RNASEH2BQ5TBB1 312 aaKnown RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 PDPK2PQ6A1A2 396 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 DSTYKQ6XUX3 929 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 C4orf50Q6ZRC1 276 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 TTC7BQ86TV6 843 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.57□□□□□ -0.723e-6■■■■■ 73.9
SMG7-215ENST00000515829 ZNF516Q92618 1163 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 UPF3AQ9H1J1 476 aaKnown RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 DPP3Q9NY33 737 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 SDR42E2A6NKP2 422 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 USP1O94782 785 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 SNUPNO95149 360 aaKnown RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 XPAP23025 273 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 GMPSP49915 693 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 CCDC15Q0P6D6 951 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 ACVR2BQ13705 512 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 TAF5Q15542 800 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 LRRC8EQ6NSJ5 796 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 RIPOR1Q6ZS17 1223 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 USP13Q92995 863 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 FSD1LQ9BXM9 530 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 FRMD8Q9BZ67 464 aaPredicted RBP10.57□□□□□ -0.72
SMG7-215ENST00000515829 ANGPTL3Q9Y5C1 460 aa10.57□□□□□ -0.72
SMG7-215ENST00000515829 DFFAO00273 331 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CYB561D2O14569 222 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 DCXO43602 365 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 LYPLA1O75608 230 aaPredicted RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 ZBTB7AO95365 584 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 VTNP04004 478 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 TGFB2P61812 414 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms